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. 2017 Sep 30;18:431. doi: 10.1186/s12859-017-1839-x

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© The Author(s). 2017

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 1 — Phylogenetic reconstruction of the Geminiviridae family and satellite DNAs. To perform the phylogenetic reconstruction of geminiviruses, all genomic sequences belonging to the genus training set were used. Sequences were aligned using the MAFFT algorithm. The phylogenetic reconstruction was obtained through the program FastTree version 2.1.7. The phylogenetic tree was visualized and edited using the program FigTree v1.4.2