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. 2017 Sep 30;18:431. doi: 10.1186/s12859-017-1839-x

Table 3.

Performance of the genus classification model using default parameters of Weka

Type of evaluation ML algorithm Weighted average among all classes
Accuracy Precision Recall F-Measure MCC AUC
Using a test set MLP 0.941 0.963 0.941 0.951 0.8940 0.971
SMO 0.835 0.865 0.835 0.795 0.6340 0.816
RF 0.934 0.941 0.934 0.936 0.8750 0.988
10-fold cross validation MLP 0.970 0.970 0.971 0.970 0.9610 0.991
SMO 0.920 0.901 0.920 0.906 0.8850 0.962
RF 0.966 0.966 0.966 0.965 0.9510 0.997
Leave-one-out MLP 0,971 0,971 0,972 0,960 0.9920 0.995
SMO 0.944 0.938 0.945 0.939 0.8810 0.946
RF 0.991 0.991 0.991 0.991 0.9550 0.999
Mean performance MLP 0.966 0.974 0.967 0.970 0.9490 0.986
SMO 0.900 0.901 0.900 0.880 0.8800 0.908
RF 0.964 0.966 0.964 0.964 0.9238 0.995