Skip to main content
. 2017 Sep 29;14:193. doi: 10.1186/s12974-017-0950-2

Table 1.

Biomarkers over time

Basic model Spline model ΔAIC favors spline
Biomarker β P P (FDR) AICbasic β1 P1 P1 (FDR) β2 P2 P2 (FDR) AICspline
PlGF −0.0488 0.0091 0.0320 112.0 −0.13 0.0002 0.0015 0.149 0.0039 0.0355 109.7 True
Log(MCP1) 0.185 0.0001 0.0009 142.1 0.18 0.0029 0.0125 0.00889 0.9090 0.9270 147.4 False
Log(MIP1) 0.151 0.0095 0.0320 176.2 0.488 < 0.0001 < 0.0001 −0.652 < 0.0001 0.0002 160.1 True
IL15 −0.0534 0.0002 0.0015 95.2 −0.0875 0.0017 0.0092 0.0641 0.1330 0.2565 99.5 False
IL-7 −0.062 0.0007 0.0039 100.8 −0.0899 0.0032 0.0125 0.055 0.2300 0.3653 105.7 False
VEGF-A 0.146 0.0045 0.0203 157.9 −0.0588 0.3110 0.3817 0.415 < 0.0001 < 0.0001 143.2 True
Log(IL-6) 0.285 <  0.0001 0.0005 117.8 0.265 0.0003 0.0022 0.0418 0.4850 0.6236 123.1 False
Log(IL-8) 0.362 < 0.0001 < 0.0001 76.3 0.312 0.0000 0.0000 0.102 0.0254 0.0686 77.9 False

Data is from linear mixed effects models for the eight biomarkers that changed over time, after correction for multiple comparisons (see Additional file 1: Table S1 for data on all biomarkers). Biomarkers were used as dependent variables (scaled and standardized to z-scores) and time (hours) was used as predictor. For each biomarker, we tested two models, with or without restricted cubic splines (using three knots) to model time. Without splines, time is modeled with one parameter (β), and with splines, times is modeled with two parameters (β1 and β2). For each biomarker, we calculated the Akaike information criterion (AIC) for the two models. AIC may be used to compare model fits, where a lower AIC is preferable and penalizes models with additional predictors (and thereby protects against overfitting). For biomarkers with AICbasic-AICspline < 2, we selected the basic model; otherwise we selected the spline model (selected model indicated with green shading). Data where p values are significant after correction for multiple comparisons [P (FDR)] are shown in italics. For example, for MIP1, the AIC selected the spline model, and both β1 (the linear component) and β2 (the cubic component) were significant, suggesting that MIP1 increased significantly during the first part of the study, and then decreased significantly during the second part of the study. In contrast, for IL-8, the AIC selected the non-spline model, and β was significant, suggesting that IL-8 increased continuously during the entire study duration. See Fig. 1 for visualizations of the significant effects