Table 3.

Significantly differing proteins between high and no/low heat treated milk-types with a change of ≥10%.

Protein Code	Number of Peptides	p-Value *	Log2 Fold Change (95% CI)	Protein Name	Protein Function
P80457	67	0.001	−0.44 (−0.56; −0.31)	Xanthine dehydrogenase/oxidase	immunity
P24627	71	0.004	−0.37 (−0.51; −0.22)	Lactoferrin	immunity
G3X6N3	57	0.006	−0.35 (−0.50; −0.20)	Serotransferrin	transport
F1MR22	42	0.004	−0.34 (−0.47; −0.21)	Polymeric immunoglobulin receptor	immunity
P80025	37	0.001	−0.33 (−0.43; −0.23)	Lactoperoxidase	immunity
G3N1R1	4	0.002	−0.32 (−0.44; −0.21)	Uncharacterized protein	unknown
F1MGU7	7	0.04	−0.30 (−0.52; −0.07)	Fibrinogen gamma-B chain	Blood coagulation
G3X7A5	80	0.002	−0.29 (−0.41; −0.18)	Complement C3	immunity
F1MZ96	10	0.002	−0.27 (−0.36; −0.18)	Uncharacterized protein	unknown
F1MX50	4	0.01	−0.27 (−0.40; −0.13)	Uncharacterized protein	cell
F1MM32	8	0.026	−0.26 (−0.43; −0.08)	Sulfhydryl oxidase	enzyme
P81265	42	0.006	−0.24 (−0.35; −0.14)	Polymeric immunoglobulin receptor	immunity
F1N076	12	0.001	−0.23 (−0.30; −0.15)	Ceruloplasmin	cell
F1MXX6	26	0.02	−0.22 (−0.35; −0.08)	Lactadherin	cell
Q08DQ0	6	0.017	−0.21 (−0.34; −0.08)	Plakophilin-3	cell
P07589	6	0.004	−0.20 (−0.30; −0.11)	Fibronectin	immunity
A6QNL0	6	0.01	−0.20 (−0.32; −0.09)	Monocyte differentiation antigen CD 14	immunity
P10152	11	0.048	−0.20 (−0.37; −0.04)	Angiogenin-1 (ribonuclease 5)	cell
F1MMD7	5	0.031	−0.20 (−0.34; −0.06)	Inter-alpha-trypsin inhibitor heavy chain H4	Protease inhibitor
Q3MHN2	6	0.043	−0.20 (−0.35; −0.04)	Complement component C9	immunity
P00735	7	0.028	−0.18 (−0.30; −0.05)	Prothrombin	immunity
F1MCF8	9	0.001	−0.17 (−0.22; −0.12)	Uncharacterized protein	immunity
P17690	9	0.005	−0.16 (−0.23; −0.09)	Beta-2-glycoprotein 1	Blood coagulation

* p-values are adjusted for multiple testing.