Table 1.
Distribution of 17,338 SNPs in 20 chromosomes identified in 158 peanut accessions.
| Chr | Chr length(Mb) | Number of SNPs | Number of genes | Average number of SNPs per Mb | Average number of genes per Mb | r2 of chr LD |
|---|---|---|---|---|---|---|
| A01 | 106.02 | 725 | 3493 | 7 | 33 | 0.177 |
| A02 | 92.63 | 1059 | 3129 | 11 | 34 | 0.356 |
| A03 | 133.14 | 970 | 4929 | 7 | 37 | 0.071 |
| A04 | 121.18 | 749 | 3833 | 6 | 32 | 0.185 |
| A05 | 108.28 | 793 | 3868 | 7 | 36 | 0.166 |
| A06 | 110.73 | 862 | 3712 | 8 | 34 | 0.149 |
| A07 | 77.95 | 482 | 2850 | 6 | 37 | 0.161 |
| A08 | 48.94 | 314 | 2940 | 6 | 60 | 0.151 |
| A09 | 119.00 | 887 | 3694 | 7 | 31 | 0.173 |
| A10 | 107.26 | 697 | 3488 | 6 | 33 | 0.186 |
| B01 | 136.91 | 1073 | 3791 | 8 | 28 | 0.084 |
| B02 | 108.64 | 710 | 3580 | 7 | 33 | 0.217 |
| B03 | 135.60 | 1427 | 5133 | 11 | 38 | 0.029 |
| B04 | 133.21 | 1047 | 4276 | 8 | 32 | 0.159 |
| B05 | 149.44 | 1011 | 4433 | 7 | 30 | 0.251 |
| B06 | 136.72 | 876 | 4372 | 6 | 32 | 0.094 |
| B07 | 125.99 | 1093 | 3813 | 9 | 30 | 0.032 |
| B08 | 129.15 | 962 | 3710 | 7 | 29 | 0.074 |
| B09 | 146.50 | 654 | 4409 | 4 | 30 | 0.196 |
| B10 | 135.81 | 947 | 4164 | 7 | 31 | 0.238 |
| A | 1025.12 | 7538 | 35936 | 7 | 35 | 0.177 |
| B | 1337.96 | 9800 | 41681 | 7 | 31 | 0.137 |
| AB | 2363.08 | 17338 | 77617 | 7 | 33 | 0.157 |
Chr, Chromosome; r2 of chr LD, average LD between all SNPs on a chromosome.