Table 2.
Six significant SNPs and predicted candidate genes associated with major agronomic traits in 158 peanut accessions.
| Trait | SNP location (bp) | Gene model | Distance to SNP (kb) | Functional annotation |
|---|---|---|---|---|
| HMS | A03-26481539 | Aradu 52T5J | 32 (26,514,081–26,516,597) | Malate dehydrogenase |
| TNB | A10-90376017 | Aradu J85DC | 8 (90,384,547–90,391,660) | Cytochrome P450 superfamily protein |
| Seed length | A03-6992035 | Aradu T1PSR | 57 (7,049,674–7,051,562) | bHLH transcription factor |
| Seed weight | ||||
| Seed weight | A03-119879303 | Aradu PZ2UH | 42 (1,19,921,885–1,19,926,789) | Auxin response factor |
| Pod weight | A05-32373760 | Aradu CVC5Q | 32 (32,341,000–32,343,951) | Microtubule-associated protein |
| Seed coat color | B03-22076736 | Araip P4GTD | 12 (22,064,568–22,066,022) | bHLH transcription factor |
HMS, Height of main stem; TNB, Total number of branches.