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. Author manuscript; available in PMC: 2018 Sep 1.
Published in final edited form as: Dev Biol. 2017 Jun 30;429(1):158–164. doi: 10.1016/j.ydbio.2017.06.033

Figure 1. The GenePalette interface integrates genome alignments with sequence browsing functions.

Figure 1

New components are labeled in green. When multiple sequences are being compared, a selector box is present that allows the user to work with any of the compared sequences directly. In the Graphical View, the aligned sequences appear below the main sequence that is being referenced. Anchor-points are marked as gray boxes, and orthologous anchor-points are connected by lines. In the Markup View, sequences that are contained within an anchor-point are indicated by a gray box. Each panel of the interface can be collapsed to make vertical space for visualizing other components.