Table 1.

miRNA target proteins targeted for relative quantification and details of their associated TDA inclusion lists.

Protein name	Gene symbol	TAIR accession	Molecular weight (Da)	Peptides targeted	Inclusion list size	Application in sample 1	Application in sample 2
ARGONAUTE 1	AGO1	1009110133	116,190	114	453	Peptide mixture #1	Peptide mixture #1
ALDO-KETO REDUCTASE FAMILY 4 MEMBER C8	AKR4C8	1009115294	34,685	39	150	Peptide mixture #6	Peptide mixture #5
ATP SULFURYLASE 1	APS1	1009119867	51,459	46	181	Peptide mixture #5	Peptide mixture #4
ATP SULFURYLASE 3	APS3	1009125796	52,029	29	116	Peptide mixture #5	Peptide mixture #4
GLYCOSYL HYDROLASE FAMILY PROTEIN	BXL7	1009108493	83,891	86	335	Peptide mixture #3	Peptide mixture #3
MYROSINASE-BINDING PROTEIN 1	MBP1	1009105202	50,167	31	118	Peptide mixture #4	Peptide mixture #4
MYROSINASE-BINDING PROTEIN 2	MBP2	1009105204	68,849	52	205	Peptide mixture #2	Peptide mixture #2