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. 2017 Sep 27;11:1177932217733422. doi: 10.1177/1177932217733422

Table 6.

Relative frequency (%) of enzymatic functions in GC-poor and GC-rich bacterial species found in the triatomine digestive tract according to the 3 first EC number digits.

ECNO.
 Ss
 Hs
 Ef
 So
 Average SD Sm
 Mm
 Gp
 Ct
 Ro
 Average SD AvGCr/AvGCpa Class of enzyme function
GC3,% 22.9 28.3 29.8 37.7 72.5 78.0 81.3 83.3 83.5
1.1.2.- 0.0 0.0 0.0 0.0 0.0 0.0 0.1 0.2 0.1 0.1 0.0 0.1 0.1 ∞ With a cytochrome as acceptor
1.1.3.- 0.0 0.0 0.1 0.1 0.1 0.1 0.0 0.2 0.3 0.0 0.4 0.2 0.2 2.8 With oxygen as acceptor
1.1.99.- 0.1 0.0 0.1 0.0 0.1 0.1 0.5 0.1 0.3 0.1 0.2 0.2 0.2 4.8 With unknown physiological acceptors
1.2.1.- 1.5 0.9 0.9 0.3 0.9 0.5 1.5 2.1 2.6 1.8 3.5 2.3 0.8 2.6 With NAD+ or NADP+ as acceptor
1.3.99.- 0.3 0.6 0.2 0.1 0.3 0.2 0.6 4.5 3.4 1.8 4.7 3.0 1.8 9.6 With unknown physiological acceptors
1.4.1.- 0.6 0.1 0.3 0.1 0.3 0.2 0.5 0.3 0.5 0.7 0.9 0.6 0.2 2.0 With NAD+ or NADP+ as acceptor
1.4.3.- 0.0 0.1 0.0 0.0 0.0 0.1 0.3 0.5 0.4 0.3 0.6 0.4 0.1 14.2 With oxygen as acceptor
1.4.4.- 0.2 0.0 0.0 0.0 0.1 0.1 0.1 0.2 0.0 0.3 0.1 0.1 0.1 2.8 With a disulfide as acceptor
1.5.3.- 0.0 0.0 0.0 0.0 0.0 0.0 0.2 0.1 0.5 0.1 0.2 0.2 0.2 ∞ With oxygen as acceptor
1.6.1.- 0.0 0.2 0.0 0.0 0.1 0.1 0.2 0.3 0.3 0.1 0.1 0.2 0.1 3.5 With NAD+ or NADP+ as acceptor
1.7.99.- 0.0 0.1 0.0 0.0 0.0 0.1 0.7 0.1 0.0 0.0 0.3 0.2 0.3 6.7 With unknown physiological acceptors
1.9.3.- 0.0 0.0 0.1 0.0 0.0 0.0 0.0 0.1 0.2 0.3 0.1 0.1 0.1 5.3 With oxygen as acceptor
1.13.11.- 0.0 0.1 0.0 0.0 0.0 0.1 0.5 0.4 0.6 0.0 1.2 0.5 0.4 17.5 With incorporation of 2 atoms of oxygen
1.13.12.- 0.0 0.0 0.0 0.0 0.0 0.0 0.1 0.3 0.3 0.1 0.5 0.2 0.2 ∞ With incorporation of 1 atom of oxygen (internal monooxygenases or internal mixed function oxidases)
1.14.11.- 0.0 0.0 0.0 0.1 0.0 0.1 0.2 0.1 0.3 0.0 0.2 0.1 0.1 4.3 With 2-oxoglutarate as 1 donor, and incorporation of 1 atom each of oxygen into both donors
1.14.12.- 0.2 0.0 0.0 0.0 0.1 0.1 0.2 0.0 0.2 0.4 0.4 0.2 0.2 4.5 With NADH or NADPH as 1 donor, and incorporation of 2 atoms of oxygen into 1 donor
1.14.13.- 0.5 0.5 0.1 0.0 0.3 0.3 0.6 1.0 3.0 0.6 1.7 1.4 1.0 4.9 With NAD or NADH as 1 donor, and incorporation of 1 atom of oxygen
1.14.99.- 0.1 0.0 0.0 0.0 0.0 0.1 0.0 0.1 0.3 0.3 0.4 0.2 0.2 9.2 Miscellaneous
1.17.7.- 0.0 0.1 0.0 0.0 0.0 0.1 0.1 0.1 0.1 0.0 0.0 0.1 0.0 2.1 With an iron-sulfur protein as acceptor
1.18.1.- 0.1 0.0 0.2 0.0 0.1 0.1 0.2 0.2 0.4 0.4 0.6 0.4 0.2 5.1 With NAD+ or NADP+ as acceptor
2.7.11.- 0.4 0.0 0.2 0.3 0.2 0.2 0.2 0.8 1.1 0.6 1.3 0.8 0.4 3.6 Protein-serine/threonine kinases
2.8.3.- 0.1 0.2 0.0 0.0 0.1 0.1 0.2 0.7 0.5 0.6 1.4 0.7 0.4 7.7 CoA-transferases
2.10.1.- 0.0 0.1 0.0 0.0 0.0 0.1 0.1 0.1 0.1 0.0 0.0 0.1 0.0 2.1 Molybdenumtransferases or tungstentransferases with sulfide groups as acceptors
3.1.6.- 0.0 0.2 0.0 0.1 0.1 0.1 0.2 0.3 0.1 0.1 0.4 0.2 0.1 2.4 Sulfuric ester hydrolases
3.3.2.- 0.1 0.0 0.1 0.0 0.1 0.1 0.1 0.4 0.2 0.1 0.4 0.3 0.2 5.1 Ether hydrolases
4.3.3.- 0.0 0.0 0.1 0.0 0.0 0.0 0.3 0.0 0.0 0.1 0.0 0.1 0.1 4.1 Amine-lyases
5.1.99.- 0.0 0.0 0.0 0.0 0.0 0.0 0.1 0.1 0.3 0.1 0.3 0.2 0.1 ∞ Acting on other compounds
5.3.3.- 0.1 0.0 0.1 0.1 0.1 0.1 0.3 0.4 0.3 0.1 0.2 0.3 0.1 3.2 Transposing C=C bonds
5.5.1.- 0.0 0.1 0.0 0.1 0.1 0.1 0.2 0.1 0.2 0.1 0.1 0.2 0.0 2.4 Miscellaneous
6.2.1.- 0.6 0.5 0.5 0.1 0.4 0.2 0.6 2.6 1.9 0.6 3.6 1.9 1.3 4.3 Miscellaneous

Abbreviations: Ct, Corynebacterium terpenotabidum; EC no., Enzyme Commission number; Ef, Enterococcus faecalis; Gp, Gordonia polyisoprenivorans; Hs, Haemophilus somnus; Mm, Mycobacterium marinum; Ro, Rhodococcus opacus; Sm, Stenotrophomonas maltophilia; So, Streptococcus oralis; Ss, Staphylococcus saprophyticus.

a

Factor difference where AvGCr is for average of GC-rich and AvGCp is for average of GC-poor.

The shading regions in Table 6 is to improve the contrast between GC-rich (gray) and GC-poor (white) genomes.