Table 1.
Annotation of genes in hpah gene cluster.
| Genes | Proposed function | Protein size | Protein with highest identity | Identity (aa)* | Accession no.a | Organism |
|---|---|---|---|---|---|---|
| OM1 | outer membrane protein | 461 | aromatic hydrocarbon degradation protein | 76% | AHI32768 | Marinobacter salaries R9SW1T |
| tbuX, toluene transporter | 54% | AAF03168 | Ralstonia pickettii PK01 | |||
| styE, styrene transporter | 45% | AAR24508 | Pseudomonas putida CA-3 | |||
| todX, toluene transporter | 38% | AAC43318 | Pseudomonas putida F1 | |||
| fadL, Long-chain fatty acid transport protein | 23% | P10384 | E. coli K12 | |||
| orf2 | 105 | |||||
| hpahAb | ferredoxin | 105 | naphthalene dioxygenase ferredoxin | 87% | AAD02135 | Pseudomonas stutzeri AN10 |
| hpahAc | RHDs α subunit | 449 | Naphthalene 1,2-dioxygenase subunit α | 83% | Q51494 | Pseudomonas aeruginosa PaK1 |
| hpahAd | RHDs β subunit | 194 | naphthalene 1,2-dioxygenase | 85% | EZQ14081 | Pseudomonas bauzanensis W13Z2 |
| hpahB | cis-naphthalene dihydrodiol dehydrogenase | 259 | 2,3-dihydroxy-2,3-dihydrophenylpropionate | 81% | EXF45161 | Pseudomonas sp. BAY1663 |
| hpahF | salicylaldehyde dehydrogenase | 452 | salicylaldehyde dehydrogenase | 86% | 4JZ6_A | Pseudomonas putida G7 |
aOnly sequences with the highest identity to orf1, hpahAb, hpahAc, hpahAd, hpahB, and hpahF from the blast results are shown in this table. OM1 shares the highest identity with a protein from Marinobacter salaries R9SW1T, and several other proteins with known functions are also listed.