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. 2017 Oct 2;7:12539. doi: 10.1038/s41598-017-12845-y

Figure 4.

Figure 4

Amino acid sequence alignments of three Fasciclin like arabinogalactan polypeptide sequences TC379245, DQ872381 and, Traes_2BS_D44E4B43A. For TC379245 (Triticum Aestivum Gene Indices), DQ872381 was the top hit on NCBI BLAST and Traes_2BS_D44E4B43A on Ensembl BLAST. Red boxes indicate the AGP GLyco-modules comprising of Alanine and Proline. Black boxes indicate amino acids comprising the FAS domain comprising of H1, [YF]H and H2 conserved regions. Red dots indicate conflict positions. Multiway sequence alignment was carried out using Clone Manager (Sci Ed, USA). Note – TC379245 ORF was corrected (‘C’ at position 425 bp removed) before translating the nucleotide sequence.