TABLE 7.
Relative overrepresentation (>20% difference) of accessory genes in the “not-cured” outcome isolates
| Locus | Description of product | “Not cured” group (n = 19) |
“Cured” group (n = 85) |
Difference (%) between “not cured” and “cured” groups | P value | ||
|---|---|---|---|---|---|---|---|
| No. of isolates | Prevalence (%) | No. of isolates | Prevalence (%) | ||||
| SERP0915 | IS256-like transposase | 11 | 57.9 | 31 | 36.5 | 21.4 | 0.085 |
| SERP1222 | Transposase | 9 | 47.4 | 16 | 18.8 | 28.5 | 0.008 |
| SERP1586 | Acetyltransferase, GNAT family | 9 | 47.4 | 22 | 25.8 | 21.5 | 0.064 |
| SERP2498 | Cassette chromosome recombinase A (CcrA) | 17 | 89.5 | 56 | 65.8 | 23.6 | 0.042 |
| SERP2499 | Cassette chromosome recombinase B (CcrB) | 17 | 89.5 | 55 | 64.7 | 24.7 | 0.034 |
| id1043_1239 | Hypothetical protein | 10 | 52.6 | 25 | 29.4 | 23.3 | 0.053 |
| id1044_0888 | Phage protein | 8 | 42.1 | 15 | 17.6 | 24.5 | 0.02 |
| id1044_0895 | Phage antirepressor protein | 8 | 42.1 | 17 | 20 | 22.1 | 0.041 |
| id1044_1909 | Antiseptic resistance protein QacA | 17 | 89.5 | 53 | 62.4 | 27.1 | 0.023 |
| id1044_2610 | Unknown | 8 | 42.1 | 15 | 17.6 | 24.5 | 0.02 |
| id1048_0369 | Replication-associated protein | 11 | 57.9 | 29 | 34.1 | 23.7 | 0.054 |
| id1632_0817 | Zn-dependent hydroxyacylglutathione hydrolase | 14 | 73.7 | 44 | 51.7 | 21.9 | 0.082 |