Table 1.
Whole genome DNA bisulfite sequencing data
Groups | Sample | Clean Base (Gb) | Clean Reads | Mapped (%) | Bisulfite Conversion Rate (%) | Total_mC (%) |
---|---|---|---|---|---|---|
HP | J07 | 66.06 | 221,116,974 | 73.88 | 99.35 | 3.65 |
J08 | 62.23 | 207,777,912 | 74.31 | 99.36 | 3.61 | |
J09 | 62.47 | 208,906,017 | 74.53 | 99.38 | 3.53 | |
LP | J10 | 63.61 | 212,805,686 | 74.68 | 99.39 | 3.49 |
J11 | 71.87 | 240,143,585 | 73.74 | 99.49 | 3.40 | |
J12 | 64.68 | 216,081,063 | 71.36 | 99.43 | 3.62 |
Clean Base (Gb) The number of Clean Base throughout the sequence
Clean Reads The number of clean reads
Mapped (%) The number of clean reads matched to the reference genome relative to the total clean reads
Bisulfite Conversion Rate (%) The number of clean reads matched to the reference genome relative to the amount of methylation of the clean reads matched to the reference genome
Total mC (%) The number of clean reads matched to the reference genome relative to the amount of methylated cytosine within the clean reads matched to the reference genome