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. 2017 Oct 3;18:187. doi: 10.1186/s13059-017-1323-y

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© The Author(s) 2017

Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 1 — MetaGen pipeline. a Sequencing the DNA of P metagenomic samples. b Pooled assembly for multiple samples. c Constructing the RCMM. d Clustering the contigs and estimating the sample profile by the EM algorithm. EM expectation-maximization, RCMM read counts mapping matrix