Table 6.
Number of genes associated with general COG functional categories
| Value | % of total | Description | |
|---|---|---|---|
| J | 248 | 6.03% | Translation, ribosomal structure and biogenesis |
| A | 0 | 0.00% | RNA processing and modification |
| K | 431 | 10.47% | Transcription |
| L | 112 | 2.72% | Replication, recombination and repair |
| B | 0 | 0.00% | Chromatin structure and dynamics |
| D | 59 | 1.43% | Cell cycle control, Cell division, chromosome partitioning |
| V | 157 | 3.81% | Defense mechanisms |
| T | 263 | 6.39% | Signal transduction mechanisms |
| M | 224 | 5.44% | Cell wall/membrane biogenesis |
| N | 63 | 1.53% | Cell motility |
| U | 28 | 0.68% | Intracellular trafficking and secretion |
| O | 142 | 3.45% | Posttranslational modification, protein turnover, chaperones |
| C | 199 | 4.83% | Energy production and conversion |
| G | 450 | 10.93% | Carbohydrate transport and metabolism |
| E | 370 | 8.99% | Amino acid transport and metabolism |
| F | 109 | 2.65% | Nucleotide transport and metabolism |
| H | 195 | 4.74% | Coenzyme transport and metabolism |
| I | 139 | 3.38% | Lipid transport and metabolism |
| P | 246 | 5.98% | Inorganic ion transport and metabolism |
| Q | 118 | 2.87% | Secondary metabolites biosynthesis, transport and catabolism |
| R | 334 | 8.11% | General function prediction only |
| S | 202 | 4.91% | Function unknown |
| – | 2226 | 37.86% | Not in COGs |
The total is based on the total number of protein coding genes in the genome of 10.1601/nm.5156 10.1601/strainfinder?urlappend=%3Fid%3DNRRL+B-4156