Table 1. Summary of the sequences produced for each pool of serum samples in the sequencing experiment.
All read counts correspond to total values, and the paired-reads real counts are half the values shown in the table. PE: paired-end reads; SE: single-end reads.
| Pool ID | Number of samples | Raw Reads (PE MiSeq) |
Clean Reads (PE + SE) |
Contigs (after assembly) |
|---|---|---|---|---|
| Male A | 8 | 5,255,854 | 3,614,220 + 6,928 | 43,188 |
| Male B | 8 | 2,669,124 | 1,769,992 + 4,738 | 19,000 |
| Female | 8 | 12,029,238 | 7,470,502 +18,074 | 83,518 |
| Ai+ImSP | 8 | 6,000,606 | 3,887,728 + 197,320 | 5,889 |
| HEV | 10 | 8,145,076 | 5,769,136 + 2,025 | 13,060 |
| Healthy A.1 | 10 | 3,413,928 | 1,873,370 + 286 | 189,820 |
| Healthy A.2 | 3,588,692 | 1,796,830 +298 | 166,167 | |
| Healthy B.1 | 10 | 3,457,150 | 2,119,224 +250 | 227,469 |
| Healthy B.2 | 3,494,586 | 1,934,704 + 4 | 185,359 |