Table I. Differential abundance of hallmark proteins known for their association with dormancy. The list contains proteins that significantly differed between AM and RE or E0 (FDR p < 0.05; FC<3), or were present only in RE or E0 but not in AM. The minus sign indicates lower abundance in the comparison between AM vs. RE or AM vs. E0 (or higher abundance in RE or E0). Numerous proteins were not detected in AM (ND AM).

Protein ID	Majority protein IDs	Majority protein titles	Fold-change (AM vs. RE)	Fold-change (AM vs. E0)
Ferritin
364	Contig 7007	ferritin heavy chain	−2443.33	−1743.58
66	Contig 2851	ferritin heavy chain a-like	−28.04	−21.49
116	Contig 9535	soma ferritin-like	−1238.12	−1359.40
183	Contig 11553; Contig 717	soma ferritin-like; soma ferritin-like	−53.07	−43.94
Glutathione s-transferase
1899	Contig 7113	glutathione s-transferase	−23.26	−32.67
269	Contig 9208	glutathione s-transferase a-like	−2.81	−2.97
1863	Contig 570	glutathione s-transferase-like	−10.38	−3.22
127	Contig 533	glutathione s-transferase-like	−3243.34	−3295.31
347	Contig 276; Contig 7601	hematopoietic prostaglandin d synthase; glutathione s-transferase-like	−5.77	−6.96
Glutathione peroxidase
570	Contig 3114	glutathione peroxidase	−3.58	−4.62
Peroxiredoxin
214	Contig 9623	peroxiredoxin prdx5	−285.68	−293.61
106	Contig 9620	peroxiredoxin prdx5	−1020.36	−850.76
Superoxide dismutase
145	Contig 10586	superoxide dismutase	−4.88	−4.13
426	Contig 5597	superoxide dismutase	−4.41	−3.36
1496	Contig 1507	superoxide dismutase	−8.922	−3.66
1963	Singlet 16655	superoxide dismutase	ND AM
2452	Contig 11562	superoxide dismutase	ND AM
536	Contig 7232	copper chaperone for superoxide dismutase	ND AM
Thioredoxin
532	Contig 665	thioredoxin	−5.00	−4.96
1453	Contig 11560	thioredoxin h-type	−3.06	−3.64
Catalase
61	Contig 3897	catalase	−21.84	−18.15
Oxidoreductase
4	Contig 411	uncharacterized oxidoreductase -like	−2223.68	−1861.37
11	Contig 448	uncharacterized oxidoreductase -like	−811.40	−813.88
175	Contig 8056	dehydrogenase reductase sdr family member 1	−5.52	−3.24
566	Contig 2703	dehydrogenase reductase sdr family member 1	−10.37	−5.51
226	Contig 12126	dehydrogenase reductase sdr family member 12	−2.56	−2.37
Selenium
25	Contig 11382	selenium-binding protein	−517.75	−506.53
35	Contig 5327	selenium-binding protein	−518.03	−711.96
1805	Contig 3315	selenoprotein o	−6.39	−5.95
508	Contig 169	selenoprotein o-like	−6.69	−7.67
LEA proteins
1	Contig 9631	protein lea- isoform k	−994.73	−1161.00
2	Contig 227;Contig 3165	late embryogenesis abundant protein family protein; late embryogenesis abundant protein family protein	−1399.92	−1111.06
Alpha crystallin
9	Contig 7561	alpha-crystallin a chain-like	−537.82	−523.10
Trehalose
1088	Contig 14054	trehalose-phosphate synthase	−15.88	−23.99
Heat-shock proteins
46	Contig 11379	heat shock hsp20	−1260.69	−1261.17
147	Contig 11391	heat shock protein	−217.35	−186.24
349	Contig 2953	heat shock protein beta-1-like	−3.49	−4.16
16	Contig 11373; Singlet 16498	heat shock protein hsp-like; heat shock protein beta-1	−4077.68	−4275.32
521	Contig 404	heat shock protein hsp20	ND AM