Table 4.
Downstream dinucleotide distribution
| Dinucleotide | DNA NB DNA NT | DNA NB DNA TP | DNA NT DNA TP | DNA NB RNA NT | DNA NB RNA TP | DNA NT RNA NT | DNA NT RNA TP | DNA TP RNA NT | DNA TP RNA TP | RNA NT RNA TP |
|---|---|---|---|---|---|---|---|---|---|---|
| AA | 5.15% | 5.11% | 5.18% | 3.17% | 3.23% | 3.34% | 3.41% | 3.26% | 3.33% | 3.67% |
| TA | 4.35% | 4.31% | 4.31% | 2.45% | 2.54% | 2.53% | 2.70% | 2.51% | 2.59% | 2.89% |
| GG | 10.55% | 10.20% | 10.50% | 15.58% | 14.40% | 15.24% | 14.17% | 15.56% | 14.50% | 17.17% |
| CG | 6.55% | 7.40% | 6.60% | 13.10% | 12.98% | 12.62% | 11.97% | 12.74% | 12.62% | 11.28% |
| TT | 5.25% | 5.05% | 5.19% | 3.27% | 3.24% | 3.45% | 3.46% | 3.33% | 3.29% | 3.33% |
| TG | 5.65% | 5.98% | 5.82% | 4.37% | 5.04% | 4.50% | 5.11% | 4.49% | 5.06% | 4.73% |
| TC | 5.34% | 5.57% | 5.61% | 4.73% | 5.24% | 4.81% | 5.27% | 4.78% | 5.30% | 4.17% |
| GC | 6.95% | 7.68% | 7.14% | 8.97% | 9.27% | 8.79% | 8.77% | 8.99% | 9.16% | 9.22% |
| AT | 3.47% | 4.00% | 3.51% | 2.43% | 2.51% | 2.45% | 2.52% | 2.44% | 2.50% | 2.73% |
| CT | 4.95% | 5.65% | 5.05% | 4.20% | 4.64% | 4.29% | 4.63% | 4.24% | 4.62% | 3.99% |
| CA | 5.76% | 5.05% | 5.59% | 5.12% | 4.67% | 5.21% | 4.86% | 5.13% | 4.71% | 4.82% |
| AG | 4.50% | 5.29% | 4.61% | 4.11% | 4.23% | 4.05% | 4.27% | 4.14% | 4.27% | 5.04% |
| GT | 6.71% | 7.62% | 7.04% | 6.44% | 7.00% | 6.46% | 6.78% | 6.48% | 7.10% | 6.34% |
| CC | 14.57% | 9.65% | 13.68% | 11.98% | 10.15% | 12.20% | 11.42% | 11.84% | 10.15% | 9.18% |
| GA | 6.18% | 6.70% | 6.33% | 6.20% | 6.73% | 6.26% | 6.63% | 6.18% | 6.67% | 7.23% |
| AC | 4.06% | 4.73% | 3.86% | 3.87% | 4.13% | 3.82% | 4.02% | 3.88% | 4.14% | 4.22% |