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. 2017 Sep 14;9(10):2546–2559. doi: 10.1093/gbe/evx188

Table 1.

Frequencies of Pherotypes within Geographic Sites

Frequency in Set
Pherotype Secreted Peptide Maela, Thailand N = 3016 Atlanta, USA N = 121 Mass., USA N = 616 Rotterdam, The Netherlands N = 141 All 4,089 Genomesa
Csp-1 EMRLSKFFRDFILQRKK 0.736 0.702 0.643 0.634 0.720
Csp-1_Short EMRLSKFFRDFIL 0.029 0 0 0 0.021
Csp-2 EMRISRIILDFLFLRKK 0.213 0.24 0.333 0.324 0.235
Csp-4_R1 EMRKMNEKSFNIFNFFRRR 0.005 0 0.003 0 0.004
Csp-4_R2 EMRKMNEKSFNIFNFFNFFRRR 0.004 0.008 0.018 0.035 0.007
Csp-4_R3 EMRKMNEKSFNIFNFFNFFNFFRRR 0.005 0 0.002 0 0.004
Otherb 0.007 0.017 0.002 0.007 0.007
None 0.002 0.033 0 0 0.003
a

This includes genome sets of variable geographic origin, such as the set of available genomes in GenBank.

b

Other pherotypes each found in < 0.2% of genomes, as well as two genomes of both Csp-1 and Csp-2 pherotype.