Table 1.
Features of the Campylobacter Strains Used in this Study
| Species | Strain | Source organism | Source type | Location | Sequence data | Sequence method | Reference | Accession number |
|---|---|---|---|---|---|---|---|---|
| Cig | 1485E | Lizard (Pogona vitticeps) | Feces | NL | WGS | 454, Illumina, PacBio | Gilbert et al. 2014b | CP009043-CP009044 |
| Cig | 2463D | Lizard (Iguana iguana) | Feces | NL | WGS | 454, Illumina, PacBio | Gilbert et al. 2015 | CP010995 |
| Cig | 11S02571-1 | Chelonian (Chelodina mccordi) | Feces | NL | MLST | Sanger | Gilbert et al. 2014a | KU697811, KU697824, KU697837, KU697850, KU697863, KU697876, KU697889 |
| Cig | 11S02571-4 | Chelonian (Chelodina mccordi) | Feces | NL | MLST | Sanger | Gilbert et al. 2014a | KU697812, KU697825, KU697838, KU697851, KU697864, KU697877, KU697890 |
| Cig | 11S02590-1 | Lizard (Pogona henrilawsonii) | Feces | NL | MLST | Sanger | Gilbert et al. 2014a | KU697813, KU697826, KU697839, KU697852, KU697865, KU697878, KU697891 |
| Cig | 11S03163-2 | Chelonian (Agrionemys horsfieldii) | Feces | NL | MLST | Sanger | Gilbert et al. 2014a | KU697814, KU697827, KU697840, KU697853, KU697866, KU697879, KU697892 |
| Cig | 12S01208-3 | Chelonian (Chelonoidis carbonaria) | Feces | NL | MLST | Sanger | Gilbert et al. 2014a | KU697815, KU697828, KU697841, KU697854, KU697867, KU697880, KU697893 |
| Cig | 12S02279-8 | Chelonian (Aldabrachelys gigantea) | Feces | NL | MLST | Sanger | Gilbert et al. 2014a | KU697816, KU697829, KU697842, KU697855, KU697868, KU697881, KU697894 |
| Cig | 12S02285-1 | Lizard (Sauromalus ater) | Feces | NL | MLST | Sanger | Gilbert et al. 2014a | KU697817, KU697830, KU697843, KU697856, KU697869, KU697882, KU697895 |
| Cig | 12S02360-1 | Lizard (Iguana iguana) | Feces | NL | MLST | Sanger | Gilbert et al. 2014a | KU697818, KU697831, KU697844, KU697857, KU697870, KU697883, KU697896 |
| Cig | 12S02842-24 | Chelonian (Aldabrachelys gigantea) | Feces | NL | MLST | Sanger | Gilbert et al. 2014a | KU697819, KU697832, KU697845, KU697858, KU697871, KU697884, KU697897 |
| Cig | 12S03949-1 | Lizard (Hemitheconyx caudicinctus) | Feces | NL | MLST | Sanger | Gilbert et al. 2014a | KU697820, KU697833, KU697846, KU697859, KU697872, KU697885, KU697898 |
| Cig | 12S05338-1 | Chelonian (Stigmochelys pardalis) | Feces | FR | MLST | Sanger | Benejat et al. 2014 | KU697821, KU697834, KU697847, KU697860, KU697873, KU697886, KU697899 |
| Cig | 13S00387-3 | Chelonian (Chelonoidis carbonaria) | Feces | NL | MLST | Sanger | Gilbert et al. 2014a | KU697822, KU697835, KU697848, KU697861, KU697874, KU697887, KU697900 |
| Cig | 13S00406-3 | Chelonian (Agrionemys horsfieldii) | Feces | NL | MLST | Sanger | Gilbert et al. 2014a | KU697823, KU697836, KU697849, KU697862, KU697875, KU697888, KU697901 |
| Cff | 82-40 | Human | Blood | US | WGS | Sanger | Perez et al. 1985 | CP000487 |
| Cft | 03-427 | Human | Blood | US | WGS | 454, Illumina, PacBio | Gilbert et al. 2013 | CP006833 |
| Cft | SP3 | Snake (Heterodon nasicus) | Feces | UK | WGS | 454, Illumina, PacBio | Gilbert et al. 2016 | CP010953 |
| Cfv | 97/608 | Bovine | Placenta | AR | WGS | 454, Illumina, PacBio | van der Graaf-van Bloois et al. 2014 | CP008810-CP008812 |
| Chh | LMG 9260 | Human | Feces | BE | WGS | 454, Illumina | Miller et al. 2016b | CP015575 |
| Chl | CCUG 27631 | Porcine | Gastric biopsy | SE | WGS | 454, Illumina | Miller et al. 2016b | CP015576 |
| Clan | NCTC 13004 | Human | Feces | SE | WGS | 454 | Logan et al. 2000 | CP015578 |
Cig, C. iguaniorum; Cff, C. fetus subsp. fetus; Cft, C. fetus subsp. testudinum; Cfv, C. fetus subsp. venerealis; Chh, C. hyointestinalis subsp. hyointestinalis; Chl, C. hyointestinalis subsp. lawsonii; Clan, C. lanienae.
AR, Argentina; BE, Belgium; FR, France; NL, Netherlands; SE, Sweden; UK, United Kingdom; US, United States. MLST, multilocus sequence typing; WGS, whole genome sequencing.