Table 2:
Genome | K-mer length (bp) | K-mer numbers | K-mer depths | Estimated genome size | Read numbers | Genome coverage |
---|---|---|---|---|---|---|
R. delavayi | 17 | 24 427 946 424 | 35 | 697 941 326 | 290 808 886 | ×41.8 |
21 | 23 264 710 880 | 33 | 704 991 238 | 290 808 886 | ×41.25 | |
25 | 22 101 475 336 | 31 | 712 950 817 | 290 808 886 | ×40.79 | |
27 | 21 519 857 564 | 30 | 717 328 585 | 290 808 886 | ×40.54 |
The genome size was estimated according to the formula Genome size = k-mer_numbers/k-mer_depths.