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. 2017 Sep 27;8:1673. doi: 10.3389/fpls.2017.01673

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Copyright © 2017 Wu, Xi, Pertl-Obermeyer, Li, Chu and Schulze.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Subcellular localizations of phosphopeptide data obtained from the ShortPhos workflow. Corresponding proteins were assigned to their subcellular compartments based on SUBA3. (A) Comparison (log₂) between numbers of phosphoprotein identified for each subcellular location by ShortPhos with the average number of phosphoproteins identified for each compartment in previous publications in the PhosPhAt database. (B) Comparison (log₂) between phosphoproteins identified in different subcellular compartment from different amounts of starting materials compared with the average number of identified proteins from membrane protein data sets publications in PhosPhAt. PM: Plasma membrane, ER: Endoplasmic reticulum, G, Golgi apparatus; V, vacuole; C, cytosol; N, nucleus; P, plastid; M, mitochondrion; EX, extracellular.