Table 1.
Summary of disease-causing mutations, Exons associated with diseases mentioned in the text are listed. Since there are no unique accession numbers for exons, the NCBI accession number is listed. The mutations having an effect on splicing are listed under features and changed nucleotides are underlined. These nucleotides are underlined in the sequence. Capital letters are exons, small letters are introns.
disease | sequence | Accession number |
Features | Ref. |
---|---|---|---|---|
FD | tttaagATGCCAAGGGGAAACTTAGAAGTTGTTCATCATCGAGCCCTGGTTTTAGCTCAGATTCGGAAGTGGTTGG ACAAgtaagtgccat | AF044195 | Change from agtgc to agcgc causes skipping | [168] |
FTDP-17 | GTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAAGGATAATATCAAACACG TCCCGGGAGGCGGCAGT | J03778 | AATAAGA to AAGAAGA causes inclusion | [169] |
FTDP-17 | GTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAAGGATAATATCAAACACG TCCCGGGAGGCGGCAGT | J03778 | AATAAGAAGCT to AATAAGCT causes skipping | [170] |
FTDP-17 | GTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACGT CCAGTCCAAGTGTGGCTCAAAGGATAATATCAAACACG TCCCGGGAGGCGGCAGT | J03778 | ATCTTAGCA to ATCTCAGCA causes inclusion | [171] |
FTDP-17 | GTGCAGATAATTAATAAGAAGCTGGATCTTAGCAACGTCCAGTCCAAGTGTGGCTCAAAGGATAATATCAAACACG TCCCGGGAGGCGGCAGT | J03778 | GCAGT to GCAAT causes inclusion | [172] |
HGPS | GGCTCCCACTGCAGCAGCTCGGGGGACCCCGCTGAGTACAACCTGCGCTCGCGCACCGTGCTGTGCGGGACCTGCG GGCAGCCTGCCGACAAGGCATCTGCCAGCGGCTCAGGA GCCCAGGTGGGCGGACCCATCTCCTCTGGCTCTTCTGC CTCCAGTGTCACGGTCACTCGCAGCTACCG | BC014507 | GGGCGGA to GGGTGGA or GTCACTCGCA to GTCATTCGCA Activates cryptic splice site | [93] |
hyperchole sterolemia | ATCTCCTCAGTGGCCGCCTCTACTGGGTTGACTCCAAACTTCACTCCATCTCAAGCATCGATGTCAACGGGGGCAA CCGGAAGACCATCTTGGAGGATGAAAAGAGGCTGGCCC ACCCCTTCTCCTTGGCCGTCTTTGAG | AY114155 | CAACGGG To CAATGGG Causes skipping | [94, 95] |
MCAD deficiency | GAGGTCTTGGACTTGGAACTTTTGATGCTTGTTTAATT AGTGAAGAATTGGCTTATGGATGTACAGGGGTTCAGACTGCTATTGAAGGAAATTCTTTGGGG | M16827 | GACTGC To GATTGC causes exon skipping, ACAGGG to ACCGGG promotes inclusion | [103] |
SMA | GGTTTTAGACAAAATCAAAAAGAAGGAAGGTGCTCACATTCCTTAAATTAAGGA | U18423 | TTTAGA to TTCAGA promotes exon skipping | [173] |