Table 4. Overrepresentation of cell-type specific genes in modules.
Only overrepresentations significant at level α = 0.05 are displayed for readability. For a complete table of p-values, see S3 Table. The 11 groups of distinct immune cell types considered consist of eosinophils (eos), basophils/mast cells (mast_baso), dendritic cells (dendr), neutrophils (neut), b-cells, t-cells, NK-cells, t-helper cells (thelp), monocyte Lipopolysaccharides (LPS) day 0 stimulation, monocyte LPS day 1 stimulation, monocyte LPS day 7 stimulation (mono_d0, mono_d1, mono_d7, respectively).
| mono_d0 | mono_d1 | mono_d7 | NK-cell | t-cell | b-cell | neut | dendr | eos | mast_baso | thelp | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| turquoise | 6.3E-03 | 3.0E-02 | |||||||||
| blue | 1.5E-02 | ||||||||||
| midnightblue | |||||||||||
| tan | 2.4E-03 | ||||||||||
| black | 9.1E-03 | ||||||||||
| cyan | |||||||||||
| salmon | 2.1E-02 | ||||||||||
| lightcyan | |||||||||||
| green | 1.7E-02 | ||||||||||
| pink | |||||||||||
| magenta | 1.8E-02 | ||||||||||
| yellow | |||||||||||
| red | 7.9E-06 | ||||||||||
| greenyellow | 1.3E-03 | ||||||||||
| grey | 1.8E-02 | 2.7E-05 |