Table 1. Proteomes used in OrthoFinder clustering and subsequent KinFin analyses.
Taxon IDa | Species Name | Source | Version | Proteinsb |
---|---|---|---|---|
AVITE | A. viteae | WBPS8 | PRJEB4306 | 10,123 |
BMALA | B. malayi | WBPS8 | PRJNA10729 | 11,008 |
BPAHA | B. pahangi | WBPS8 | PRJEB497 | 14,664 |
CBRIG | C. briggsae | WBPS8 | PRJNA10731 | 22,305 |
CELEG | C. elegans | WBPS8 | PRJNA13758 | 20,219 |
DIMMI | D. immitis | WBPS8 | PRJEB1797 | 12,423 |
DMEDI | D. medinensis | WBPS8 | PRJEB500 | 10,919 |
EELAP | E. elaphi | WBPS8 | PRJEB502 | 10,409 |
LOA1 | L. loa | WBPS8 | PRJNA246086 | 12,473 |
LOA2 | L. loa | WBPS8 | PRJNA60051 | 14,908 |
LSIGM | L. sigmodontis | WBPS8 | PRJEB3075 | 10,001 |
OFLEX | O. flexuosa | WBPS8 | PRJEB512 | 16,094 |
OOCHE1 | O. ochengi | WBPS8 | PRJEB1204 | 12,807 |
OOCHE2 | O. ochengi | WBPS8 | PRJEB1809 | 13,580 |
OVOLV | O. volvulus | WBPS8 | PRJEB513 | 12,110 |
SLABI | S. labiatopapillosa | ngenomes.org | nSl.1.1 | 9,687 |
TCALL | T. callipaeda | WBPS8 | PRJEB1205 | 10,911 |
WBANC1 | W. bancrofti | WBPS8 | PRJEB536 | 13,056 |
WBANC2 | W. bancrofti | WBPS8 | PRJNA275548 | 11,053 |
ID used in KinFin analysis.
Proteins included in the clustering analysis.