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. 2016 Aug 25;8(9):2939–2951. doi: 10.1093/gbe/evw206

Table 2.

Omega Values (dN/dS) for the Different Gene Classes in the Chloroplast Genomes of Ulvophycean Algae

Single-ω model
Two-ω model
ΔAIC
ω global ω background ω Ostreobium
Photosynthetic light reactions
 atp 0.025 0.028 0.009 25.043
 pet 0.032 0.034 0.016 3.625
 psa 0.019 0.021 0.007 29.851
 psb 0.029 0.031 0.013 40.538
Photosynthetic dark reactions
 chl 0.022 0.024 0.012 4.749
 ccsA 0.025 0.025 0.032 −1.938
 rbcL 0.020 0.023 0.007 13.922
Translation and protein-modifying enzymes
 clp 0.014 0.017 0.004 2.825
 infA 0.039 0.044 0.020 0.660
 rpl 0.039 0.040 0.029 −0.643
 rps 0.035 0.036 0.022 1.179
 tufA 0.023 0.025 0.011 1.516
Proteins not related to photosynthesis
 accD 0.036 0.041 0.017 1.379
 cys 0.027 0.027 6.291 −2.000
 rpo 0.003 0.003 0.002 −1.749

Note.—Two models were tested a single ω for all lineages and a model with different ω values for Ostreobium and all other species. The goodness of fit of the two-ω over the single-ω model is given by ΔAIC.