Table 3.
TF families of DEGs in yellow and brown seed coats.
| TF family | Gene number | |
|---|---|---|
| Up-regulated | Down-regulated | |
| ERF | 65 | 2 |
| C2H2 | 36 | 13 |
| WRKY | 41 | 2 |
| NAC | 40 | 2 |
| MYB | 14 | 18 |
| M-type_MADS | 5 | 21 |
| bHLH | 20 | 4 |
| MYB_related | 11 | 10 |
| Dof | 2 | 14 |
| HD-ZIP | 5 | 7 |
| C3H | 7 | 4 |
| LBD | 5 | 6 |
| bZIP | 5 | 5 |
| MIKC_MADS | 3 | 5 |
| ARR-B | 1 | 6 |
| B3 | 3 | 4 |
| GRAS | 7 | ND |
| TCP | 5 | 2 |
| AP2 | 5 | 1 |
| G2-like | 2 | 4 |
| GATA | 3 | 3 |
| HSF | 5 | 1 |
| Trihelix | 5 | 1 |
| RAV | 4 | 1 |
| YABBY | ND | 4 |
| ZF-HD | 4 | ND |
| BBR-BPC | 2 | 1 |
| CO-like | 3 | ND |
| SBP | 3 | ND |
| TALE | ND | 3 |
| CAMTA | 1 | 1 |
| DBB | 1 | 1 |
| GeBP | 1 | 1 |
| NF-X1 | 2 | ND |
| NF-YA | 2 | ND |
| ARF | 1 | ND |
| BES1 | ND | 1 |
| CPP | 1 | ND |
| HB-other | ND | 1 |
| NF-YB | ND | 1 |
| Nin-like | ND | 1 |
| S1Fa-like | 1 | ND |
| WOX | ND | 1 |
ND, not detected.