Table 3.
Genome statistics
| Attribute | Value | % of Totala |
|---|---|---|
| Genome size (bp) | 4,782,107 | 100.00 |
| DNA coding (bp) | 4,218,785 | 88.22 |
| DNA G + C (bp) | 2,424,397 | 50.70 |
| DNA scaffolds | 84 | |
| Total genes | 4562 | 100.00 |
| Protein coding genes | 4465 | 97.88 |
| RNA genes | 97 | 2.13 |
| Pseudo genes | 22 | 0.48 |
| Genes in internal clusters | 1171 | 25.67 |
| Genes with function prediction | 3831 | 83.98 |
| Genes assigned to COGs | 3814 | 83.60 |
| Genes with Pfam domains | 275 | 6.03 |
| Genes with signal peptides | 174 | 3.81 |
| Genes with transmembrane helices | 1080 | 23.67 |
| CRISPR repeats | 2 |
aThe total is based on either the size of the genome in base pairs or the total number of proteins coding genes in the annotated genome
All the information has been obtained from Prokka annotation