Table 2.
Gene function of P1 region and coding sequence alignment.
| Gene | MRI Z1-201 | MRI Z1-199 | FSL S3-026 | NNA011 | LZF005 | 515 | HN016 |
|---|---|---|---|---|---|---|---|
| Function (length) | P.I.* | P.I. | P.I. | P.I. | P.I. | P.I. | |
| 1 | hypothetical protein (173) | 100 | 99.42 | 91.28 | 0 | 0 | 0 |
| 2 | hypothetical protein (181) | 100 | 99.44 | 97.22 | 0 | 0 | 0 |
| 3 | phage encoded DNA polymerase I (657) | 100 | 99.85 | 91.53 | 0 | 0 | 88.14 |
| 4 | Phage protein (188) | 100 | 99.47 | 94.25 | 0 | 0 | 96.55 |
| 5 | Phage protein (374) | 100 | 99.73 | 95.43 | 0 | 0 | 91.42 |
| 6 | hypothetical protein (108) | 100 | 100 | 94.39 | 0 | 0 | 88.79 |
| 7 | hypothetical protein (38) | 100 | 100 | 94.59 | 0 | 0 | 0 |
| 8 | DNA primase, phage associated (780) | 97.82 | 97.69 | 93.32 | 0 | 0 | 76.89 |
| 9 | Phage protein (94) | 100 | 100 | 91.4 | 0 | 0 | 83.87 |
| 10 | DNA helicase, phage-associated (459) | 100 | 100 | 93.67 | 0 | 0 | 91.48 |
| 11 | unknown phage protein (166) | 100 | 99.39 | 91.03 | 0 | 0 | 85.28 |
| 12 | S-adenosylmethionine synthetase (247) | 100 | 99.59 | 93.71 | 44.3 | 44.3 | 93.01 |
| 13 | hypothetical protein (49) | 100 | 0 | 0 | 0 | 0 | 0 |
| 14 | mRNA interferase YafQ (91) | 100 | 100 | 0 | 0 | 0 | 0 |
| 15 | Antitoxin DinJ (binds YafQ toxin) (94) | 100 | 100 | 0 | 0 | 0 | 0 |
| 16 | hypothetical protein (152) | 100 | 100 | 88.08 | 0 | 0 | 86.09 |
| 17 | Adenine-specific methyltransferase (418) | 100 | 99.04 | 94.63 | 0 | 0 | 92.94 |
| 18 | endonuclease of the HNH family (197) | 100 | 100 | 0 | 0 | 0 | 0 |
| 19 | DNA-cytosine methyltransferase (393) | 100 | 100 | 95.66 | 0 | 0 | 94.9 |
| 20 | hypothetical protein (45) | 100 | 0 | 0 | 0 | 0 | 0 |
| 21 | hypothetical protein (84) | 100 | 100 | 53.01 | 0 | 0 | 0 |
| 22 | hypothetical protein (130) | 97.67 | 98.41 | 88.89 | 0 | 0 | 58.59 |
| 23 | Phage terminase, small subunit (158) | 100 | 99.36 | 96.82 | 0 | 0 | 96.63 |
| 24 | Phage terminase, large subunit (521) | 100 | 99.81 | 98.27 | 0 | 20.97 | 97.5 |
| 25 | hypothetical protein (98) | 100 | 100 | 97.94 | 0 | 0 | 0 |
| 26 | hypothetical protein (113) | 100 | 100 | 96.43 | 0 | 0 | 0 |
| 27 | hypothetical protein (68) | 100 | 100 | 95.52 | 0 | 0 | 0 |
| 28 | Phage portal protein (446) | 100 | 100 | 95.67 | 0 | 0 | 97.20 |
| 29 | Prophage Clp protease-like protein (175) | 100 | 100 | 78.53 | 0 | 49.59 | 79.31 |
| 30 | Phage major capsid protein (403) | 100 | 100 | 89.55 | 0 | 0 | 89.55 |
| 31 | unknown phage protein (86) | 100 | 100 | 98.82 | 0 | 0 | 97.65 |
| 32 | hypothetical protein (113) | 100 | 100 | 87.5 | 0 | 0 | 91.07 |
| 33 | prophage pi2 protein 37 (123) | 100 | 98.36 | 95.08 | 0 | 0 | 95.90 |
| 34 | prophage pi2 protein 38 (109) | 100 | 100 | 95.37 | 0 | 0 | 93.52 |
| 35 | Prophage pi2 protein 39 (190) | 100 | 98.94 | 98.41 | 0 | 0 | 96.83 |
| 36 | prophage pi2 protein 40 (140) | 99.28 | 96.40 | 99.28 | 0 | 0 | 97.12 |
| 37 | Phage tail length tape-measure protein (1040) | 100 | 97.40 | 96.82 | 0 | 0 | 96.63 |
| 38 | hypothetical protein (242) | 100 | 96.68 | 96.68 | 0 | 0 | 95.44 |
| 39 | Phage endopeptidase (972) | 100 | 99.04 | 92.28 | 0 | 0 | 94.75 |
| 40 | Phage capsid and scaffold (619) | 100 | 99.19 | 95.47 | 0 | 0 | 95.47 |
| 41 | Holin (135) | 100 | 96.27 | 88.06 | 0 | 0 | 71.64 |
| 42 | Phage-associated cell wall hydrolase (490) | 100 | 95.09 | 95.5 | 0 | 0 | 61.86 |
| 43 | Zinc-finger protein (134) | 100 | 95.49 | 93.98 | 0 | 0 | 0 |
| 44 | hypothetical protein (54) | 100 | 96.23 | 96.23 | 0 | 0 | 0 |
| 45 | Site-specific recombinase (403) | 100 | 98.26 | 96.27 | 0 | 0 | 39.03 |
| 46 | Phage integrase (522) | 100 | 99.42 | 94.24 | 0 | 0 | 48.91 |
*
Percent identity.