Table 3.
Bottleneck test results bottleneck test results showing the P-values (P) under the two-phase model (TPM), the infinite allele model (IAM) and using the mode-shift test (a result of normal L-shaped (L) indicates no evidence of a bottleneck). All estimates of Ne were made using the software NeESTIMATOR v2 [50], and all tests for population bottlenecks were made using the software BOTTLENECK v. 1.2.02 [55]
| Region | Collections used | TPM P | IAM P | Mode-Shift |
|---|---|---|---|---|
| Nguruman (all sites) | 2015 | 0.500 | 0.009* | L |
| Nguruman (all sites) | 2009 | 0.539 | 0.188 | L |
| Nguruman (all sites) | 2003 | 0.539 | 0.042* | L |
| Ruma (all sites) | 2015 | 0.787 | 0.545 | L |
| Ruma (all sites) | 2006 | 0.947 | 0.722 | L |
| Ruma (all sites) | 2005 | 0.784 | 0.500 | L |
| Ruma (all sites) | 2003 | 0.820 | 0.326 | L |
*P < 0.05