Table 1.
Structural and enzymatic characteristics of synthase–glutaminase complexes comprising either the stTrpEx_Δ synthase or the ppPabA* glutaminase
Kinetic parameters of AS formation‡ | Glutaminase activity§ | ||||
Synthase–glutaminase pairs | Complex formation,† native MS | kcat, s−1 | KmCH, μM | kcat/KmCH, M−1⋅s−1 | fstim |
stTrpEx_Δ + stTrpG | Ex_Δ2:G2 tetramer | — | — | — | n.a. |
stTrpEx_Δ + ecTrpGD | Ex_Δ2:GD2 tetramer | — | — | — | n.a. |
stTrpEx_Δ + ppPabA | Ex_Δ2:A2 tetramer | — | — | — | 2.0 ± 0.1 |
stTrpEx_Δ + smPabA | Ex_Δ2:A2 tetramer | — | — | — | <2.0 |
stTrpEx_Δ + ecPabA | Ex_Δ2:A2 tetramer | — | — | — | <2.0 |
stTrpEx_Δ + bsPabA | Ex_Δ2:A2 tetramer | — | — | — | <2.0 |
ppPabA* + stTrpEx | Ex2:A2 tetramer | 0.31 ± 0.05 | 6.2 ± 3.5 | 5.6 × 104 | 41.8 ± 3.0 |
ppPabA* + ecTrpEx | Ex2:A2 tetramer | 0.63 ± 0.05 | 9.6 ± 2.0 | 6.7 × 104 | 45.2 ± 3.3 |
ppPabA* + smTrpEx | Ex2:A2 tetramer | 0.04 ± 0.004 | 5.2 ± 2.8 | 8.8 × 103 | 49.0 ± 2.7 |
ppPabA* + ppTrpE | E2:A2 tetramer | 0.9 ± 0.06 | 8.4 ± 1.8 | 1.1 × 105 | 11.5 ± 3.0 |
ppPabA* + ppPabB | B:A dimer | 0.2 ± 0.03 | 25.0 ± 2.6 | 6.7 × 103 | 19.1 ± 0.6 |
Representative spectra and molecular weights are provided in SI Appendix, Fig. S8 and Table S7.
Values are the mean and SD from at least three independent measurements. stTrpEx_Δ was inactive (−).
Stimulation factors (fstim) are based on the apparent glutamine hydrolysis rate of the listed glutaminases (SI Appendix, Table S9) and that of ppPabA* (kapp = 0.005 s−1). Glutaminase stimulation at the lower end of the assay detection limit is <2.0. n.a., not applicable (TrpG glutaminases do not display glutaminase activity in the absence of a synthase).