Table 5. The 34 proteins studied: name, PDB codes, Spearman rank correlation of the native structure (experimental vs. calculated intensities, in integer intervals between 250 nm or the lowest available signals and 300 nm) and its location (percentile) in the distribution generated by the decoy sets.
| Spearman rank correlation | Rank in decoys/% | ||
| Adenylate kinase | 2ECK | 0.89 | 1 |
| Calmodulin | 4CLN | 0.93 | 1 |
| Papain | 3LFY | 0.91 | 1 |
| Ribonuclease T1 | 1RN1 | 0.75 | 1 |
| Sticholysin II | 1O72 | 0.81 | 5 |
| Apolipophorin III | 1AEP | 0.71 | 6 |
| Human carbonic anhydrase II | 2CBA | 0.77 | 6 |
| Phospholipase A2 (Ca2+) | 1PSJ | 0.87 | 6 |
| Ribonuclease A | 1AFU | 0.96 | 6 |
| β-Lactamase | 1BTL | 0.93 | 8 |
| Insulin | 5ENA | 0.93 | 8 |
| Hen egg white lysozyme | 1HF4 | 0.76 | 9 |
| Subtilisin BPN′ | 1ST2 | 0.89 | 9 |
| Neocarzinostatin | 1NOA | 0.81 | 10 |
| Phosphatidylethanolamine-binding protein | 1A44 | 0.78 | 10 |
| Dihydrofolate reductase | 4P3Q | 0.63 | 13 |
| Relaxin | 6RLX | 0.82 | 15 |
| Monellin | 1IV9 | 0.59 | 21 |
| Extracellular domain of human tissue factor | 2HFT | 0.66 | 25 |
| Bovine pancreatic trypsin inhibitor | 5PTI | 0.66 | 29 |
| Thioredoxin | 2TRX | 0.67 | 29 |
| Odorant binding protein | 1A3Y | 0.76 | 34 |
| α-Lactalbumin | 1A4V | 0.2 | 37 |
| Rhodanese | 1DP2 | –0.1 | 41 |
| β-2 microglobulin (human) | 1LDS | 0.14 | 45 |
| Barnase | 1A2P | 0.07 | 46 |
| Interleukin 6 | 1ALU | –0.38 | 48 |
| Chymotrypsinogen A | 2CGA | –0.08 | 53 |
| Dehydroquinase II | 2BT4 | 0.01 | 54 |
| Cardiotoxin | 4OM4 | –0.47 | 71 |
| Myoglobin (whale) | 1UFP | –0.8 | 73 |
| Staphylococcal nuclease | 1STN | –0.39 | 81 |
| Interleukin 4 (cytokine) | 2B8U | –0.43 | 90 |
| Tryptophan synthase α-subunit | 1WQ5 | –0.74 | 100 |