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. 2017 Oct 12;12(10):e0186299. doi: 10.1371/journal.pone.0186299

Table 2. P. sungorus specific primer sequences used for standard plasmid generation and qPCR.

gene 5´3´sequence melting amplicon
temperature length
Agrp forward GCC TTT GCC CAA CAT CCG TTG 59.8 99 bp
reverse GCT ACT GCC GCT TCT TCA ATG CC 60.9
Bmal1 forward GCT CAA GAG ACC CCA GGT TAT CC 59.1 145 bp
reverse GGC TCA TGA TGA CAG CCA TCG C 60.8
Dio2 forward TGA AGA AAC ACA GGA GCC AAG AGG A 60.0 111 bp
reverse CAT TAT TGT CCA TGC GGT CAG CCA 59.8
Mct8 forward GTC CTC TCA TTC CTG CTC CTG G 59.2 151 bp
reverse GTC CCA CCA GCT CAA ATG CAA TG 59.0
Npy forward CCA GGC AGA GAT ACG GCA AGA GAT C 60.7 119 bp
reverse CCA TCA CCA CAT GGA AGG GTC C 60.0
Per1 forward CTC TTC TTC TGG CAA TGG CAA GGA C 60.0 120 bp
reverse GCA CTC AGG AGG CTA TAG GCA ATG 59.4
Actb forward ACC TCA TGA AGA TCC TGA CCG AGC 60.3 120 bp
reverse CCA TCT CTT GCT CGA AGT CCA GGG 61.1
Hprt forward AGT CCC AGC GTC GTG ATT AGT GAT G 60.4 140 bp
reverse CGA GCA AGT CTT TCA GTC CTG TCC A 60.5
Rplp0 forward GCA ACA GTC GGG TAA CCA ATC TGC 60.4 153 bp
reverse CTTCGGGCTCATCATCCAGCAG 60.1
Rn18s forward GCT CCT CTC CTA CTT GGA TAA CTG TG 59.2 126 bp
reverse CGG GTT GGT TTT GAT CTG ATA AAT GCA 59.4