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. 2017 Oct 13;7:13169. doi: 10.1038/s41598-017-13709-1

Figure 3.

Figure 3

Three-dimensional representation of the molecular docking of homology modelled wheat ATI CM3 (green ribbon) onto human TLR4-MD2 complex (grey ribbon). For better clarity of ATI-TLR4 complex visualization, MD2 molecule was removed after docking procedure. Black box highlights the oligopeptides constituting the discontinuous ATI binding interface. Oligopeptides are visualized as sticks (Panel A). Predicted cleavage sites by pepsin on wheat ATI CM3 (Panel B). The oligopeptides constituting the discontinuous ATI binding interface are highlighted in green. Residues constituting signal peptide (excluded from docking procedure) are highlighted in light blue.