Table 2.
Summary of DCHS1 Variants Detected in Patient
Chr | Gene | Positiona | dbSNP ID | SNP | Residue change | European population frequency (gnomAD database) | Type | Protein prediction CADDb Score |
---|---|---|---|---|---|---|---|---|
11p15.4 | DCHS1 | 6,662,255 | rs145099391 | G > A | p.P197L | 8.89 × 10−4 | Missense Exon 2 |
22.30 |
11p15.4 | DCHS1 | 6,646,574 | rs753548138 | G > A | p.T2334 M | 9.02 × 10−6 | Missense Exon 19 |
23.30 |
aRefSeq NM_003737.3
bCADD scores are derived from several different functional annotation tools. A score of 20 means that a variant is amongst the top 1% of deleterious variants in the human genome. The higher the score, the more likely that variant is predicted to be deleterious to the protein [33]