Table 1.
Sequence type and assembly statistics of the 34 sequenced Listeria monocytogenes isolates.
Isolate ID | ST | No. of contigs | N50 | Genome size (bp) | Fold coverage |
---|---|---|---|---|---|
LM1 | 14 | 13 | 579785 | 3022050 | 84,03 |
LM2 | 14 | 14 | 456298 | 3022428 | 41,78 |
LM3 | 14 | 13 | 580466 | 3022420 | 114,86 |
LM5 | 14 | 15 | 579913 | 3022168 | 57,83 |
LM8 | 14 | 14 | 580478 | 3023685 | 176,68 |
LM9 | 14 | 13 | 580478 | 3023308 | 121,54 |
LM10 | 14 | 14 | 580478 | 3023687 | 167,18 |
LM11 | 224 | 13 | 511384 | 2925197 | 159 |
LM15 | 14 | 13 | 580472 | 3022932 | 146,98 |
LM16 | 14 | 14 | 580454 | 2986892 | 131,2 |
LM17 | 14 | 14 | 580454 | 2986900 | 149,23 |
LM18 | 14 | 14 | 580454 | 2986900 | 187,12 |
LM19 | 14 | 15 | 580471 | 3023022 | 172,15 |
LM22 | 14 | 13 | 580454 | 3022659 | 79,03 |
LM27 | 121 | 26 | 529438 | 3060499 | 120,24 |
LM29 | 121 | 28 | 530140 | 3061007 | 131,41 |
LM31 | 121 | 25 | 530140 | 3060579 | 127,78 |
LM35 | 14 | 13 | 580472 | 3022414 | 106,18 |
LM39 | 14 | 15 | 580604 | 3022475 | 120,54 |
LM41 | 14 | 13 | 580472 | 3022475 | 126,39 |
LM44 | 14 | 13 | 580478 | 3022308 | 144,31 |
LM46 | 14 | 13 | 580478 | 3022405 | 85,42 |
LM47 | 14 | 13 | 580478 | 3022625 | 106,27 |
LM50 | 121 | 24 | 530364 | 3068560 | 111,58 |
LM51 | 121 | 25 | 530139 | 3060573 | 137,29 |
LM53 | 121 | 21 | 530354 | 3062194 | 139,38 |
LM54 | 14 | 13 | 580472 | 3022424 | 150,5 |
LM55 | 14 | 13 | 580478 | 3022427 | 142,63 |
LM56 | 14 | 13 | 580478 | 3022415 | 121,34 |
LM57 | 14 | 13 | 580478 | 3022426 | 134,73 |
LM58 | 14 | 13 | 580478 | 3022498 | 123,61 |
LM59 | 14 | 13 | 580478 | 3022821 | 135,9 |
LM60 | 14 | 13 | 580472 | 3022629 | 132,49 |
LM61 | 14 | 13 | 580478 | 3022408 | 108,5 |
ST, sequence type.