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. Author manuscript; available in PMC: 2017 Oct 16.
Published in final edited form as: Cell Rep. 2017 Oct 10;21(2):366–380. doi: 10.1016/j.celrep.2017.09.039

Figure 3. Single-Cell Differential Expression Analysis Reveals Hundreds of Genes Regulated during Cellular Reprogramming of Microglia in Response to Neurodegeneration.

Figure 3

(A–C) Bar plots showing the top 5 Gene Ontology (GO) terms (biological processes) associated with genes upregulated in (A) cluster 3 compared with cluster 2, (B) cluster 7 compared with cluster 2, and (C) cluster 6 compared with cluster 2.

(D and E) Bar graphs showing the fold change in gene expression of the top upregulated genes associated with the top 10 GO terms in cells of cluster 3 (D) and cluster 7 (E) compared with cells of cluster 2.

(F) Bar graph showing the fold change in gene expression of selected genes associated with the top 10 GO terms in cells of cluster 6 compared with cells of cluster 2.

For all panels, error bars show the 95% confidence interval.