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. 2017 Oct 13;5:e3863. doi: 10.7717/peerj.3863

Figure 4. Pelagiidae COI Phylogeny.

Figure 4

Bayesian inference (BI) COI tree reconstructed from CLUSTAL alignment using Mr. Bayes v3.2.4 and applying the GTR+I+G model of sequence evolution. Numbers adjacent to branches show bootstrap support if ≥0.70 (presented as a percentage), followed by bootstrap support from maximum likelihood (ML) analysis if ≥50%. ML phylogeny was reconstructed using PhyML v3.0 (Guindon et al., 2010) applying the TPM2uf+I+G model of sequence evolution (-lnl 5451.81154) as determined by jMODELTEST v2.1.7 (Darriba et al., 2012). Abbreviations refer to Tables 1 and 2. Specific identification to the right of the tree indicates final species designations. Clades colored in gray were originally identified as Chrysaora quinquecirrha. Norfolk (VA) individuals NF1–NF3 were identified as white Chesapeake Bay color morph and individuals NF4–NF5 as red-striped Chesapeake Bay color morph (Figs. 3D and 3E).