Skip to main content
. 2016 Aug 2;38:20–37. doi: 10.3767/003158517X692788

Table 2b.

Strains used for the phylogenetic analysis of the Colletotrichum acutatum species complex with details about host, location, and GenBank accession numbers.

Species Isolate Host Location GenBank accessions
ITS GAPDH CHS-1 HIS3 ACT TUB2
C. acutatum CBS 112996* Carica papaya Australia JQ005776 JQ948677 JQ005797 JQ005818 JQ005839 JQ005860
CBS 144.29 Capsicum annuum Sri Lanka JQ948401 JQ948732 JQ949062 JQ949392 JQ949722 JQ950052
C. chrysanthemi CBS 126518 Carthamus sp. Netherlands JQ948271 JQ948601 JQ948932 JQ949262 JQ949592 JQ949922
IMI 364540 Chrysanthemum coronarium China JQ948272 JQ948602 JQ948933 JQ949263 JQ949593 JQ949923
C. fioriniae CAUA18 Capsicum annuum China KP145016 KP145096 KP145048 KP145064 KP145032 KP145080
CAUA20 Capsicum annuum China KP145226 KP145162 KP145290 KP145194 KP145130 KP145258
CAUA24 Capsicum annuum China KP145017 KP145097 KP145049 KP145065 KP145033 KP145081
CAUA25 Capsicum annuum China KP145018 KP145098 KP145050 KP145066 KP145034 KP145082
CAUA26 Capsicum annuum China KP145019 KP145099 KP145051 KP145067 KP145035 KP145083
CAUA27 Capsicum annuum China KP145020 KP145100 KP145052 KP145068 KP145036 KP145084
CAUA28 Capsicum annuum China KP145021 KP145101 KP145053 KP145069 KP145037 KP145085
CAUA29 Capsicum annuum China KP145022 KP145102 KP145054 KP145070 KP145038 KP145086
CAUA30 Capsicum annuum China KP145023 KP145103 KP145055 KP145071 KP145039 KP145087
CAUA31 Capsicum annuum China KP145024 KP145104 KP145056 KP145072 KP145040 KP145088
CAUA32 Capsicum annuum China KP145025 KP145105 KP145057 KP145073 KP145041 KP145089
CAUA37 Capsicum annuum China KP145026 KP145106 KP145058 KP145074 KP145042 KP145090
CAUA38 Capsicum annuum China KP145027 KP145107 KP145059 KP145075 KP145043 KP145091
CAUA39 Capsicum annuum China KP145028 KP145108 KP145060 KP145076 KP145044 KP145092
CAUA40 Capsicum annuum China KP145029 KP145109 KP145061 KP145077 KP145045 KP145093
CAUA41 Capsicum annuum China KP145030 KP145110 KP145062 KP145078 KP145046 KP145094
CAUA48 Capsicum annuum China KP145031 KP145111 KP145063 KP145079 KP145047 KP145095
CBS 125396 Malus domestica USA JQ948299 JQ948629 JQ948960 JQ949290 JQ949620 JQ949950
CBS 127537 Vaccinium sp. USA JQ948317 JQ948647 JQ948978 JQ949308 JQ949638 JQ949968
CBS 128517* Fiorinia sp. USA JQ948292 JQ948622 JQ948953 JQ949283 JQ949613 JQ949943
CBS 129916 Vaccinium sp. USA JQ948317 JQ948647 JQ948978 JQ949308 JQ949638 JQ949968
CBS 293.67 Persea sp. Australia JQ948310 JQ948640 JQ948971 JQ949301 JQ949631 JQ949961
CBS 127601 Mangifera sp. Australia JQ948311 JQ948641 JQ948972 JQ949302 JQ949632 JQ949962
CBS 129947 Vitis sp. Portugal JQ948343 JQ948673 JQ949004 JQ949334 JQ949664 JQ949994
CBS 200.35 Rubus sp. USA JQ948293 JQ948623 JQ948954 JQ949284 JQ949614 JQ949944
C. gloeosporioides IMI 356878* Citrus sinensi Italy JX010152 JX010056 JX009818 JX009531 JX010445
C. godetiae CBS 133.44* Godetia sp. Denmark JQ948402 JQ948733 JQ949063 JQ949393 JQ949723 JQ950053
C. guajavae IMI 350839* Psidium sp. India JQ948270 JQ948600 JQ948931 JQ949261 JQ949591 JQ949921
C. laticiphilum CBS 112989* Hevea sp. India JQ948289 JQ948619 JQ948950 JQ949280 JQ949610 JQ949940
C. nymphaeae CBS 515.78* Nymphaea sp. Netherlands JQ948197 JQ948527 JQ948858 JQ949188 JQ949518 JQ949848
C. orchidophilum CBS 632.80* Dendrobium sp. USA JQ948151 JQ948481 JQ948812 JQ949142 JQ949472 JQ949802
C. salicis CBS 607.94* Salix sp. Netherlands JQ948460 JQ948791 JQ949121 JQ949451 JQ949781 JQ950111
C. scovillei CAUA1 Capsicum annuum China KP145208 KP145144 KP145272 KP145176 KP145112 KP145240
CAUA2 Capsicum annuum China KP145209 KP145145 KP145273 KP145177 KP145113 KP145241
CAUA3 Capsicum annuum China KP145210 KP145146 KP145274 KP145178 KP145114 KP145242
CAUA4 Capsicum annuum China KP145211 KP145147 KP145275 KP145179 KP145115 KP145243
CAUA5 Capsicum annuum China KP145212 KP145148 KP145276 KP145180 KP145116 KP145244
CAUA6 Capsicum annuum China KP145213 KP145149 KP145277 KP145181 KP145117 KP145245
CAUA7 Capsicum annuum China KP145214 KP145150 KP145278 KP145182 KP145118 KP145246
CAUA8 Capsicum annuum China KP145215 KP145151 KP145279 KP145183 KP145119 KP145247
CAUA9 Capsicum annuum China KP145216 KP145152 KP145280 KP145184 KP145120 KP145248
CAUA10 Capsicum annuum China KP145217 KP145153 KP145281 KP145185 KP145121 KP145249
CAUA11 Capsicum annuum China KP145218 KP145154 KP145282 KP145186 KP145122 KP145250
CAUA12 Capsicum annuum China KP145219 KP145155 KP145283 KP145187 KP145123 KP145251
CAUA13 Capsicum annuum China KP145220 KP145156 KP145284 KP145188 KP145124 KP145252
CAUA14 Capsicum annuum China KP145221 KP145157 KP145285 KP145189 KP145125 KP145253
CAUA15 Capsicum annuum China KP145222 KP145158 KP145286 KP145190 KP145126 KP145254
CAUA16 Capsicum annuum China KP145223 KP145159 KP145287 KP145191 KP145127 KP145255
CAUA17 Capsicum annuum China KP145224 KP145160 KP145288 KP145192 KP145128 KP145256
CAUA19 Capsicum annuum China KP145225 KP145161 KP145289 KP145193 KP145129 KP145257
CAUA21 Capsicum annuum China KP145227 KP145163 KP145291 KP145195 KP145131 KP145259
CAUA22 Capsicum annuum China KP145228 KP145164 KP145292 KP145196 KP145132 KP145260
CAUA23 Capsicum annuum China KP145229 KP145165 KP145293 KP145197 KP145133 KP145261
CAUA33 Capsicum annuum China KP145230 KP145166 KP145294 KP145198 KP145134 KP145262
CAUA34 Capsicum annuum China KP145231 KP145167 KP145295 KP145199 KP145135 KP145263
CAUA35 Capsicum annuum China KP145232 KP145168 KP145296 KP145200 KP145136 KP145264
CAUA36 Capsicum sp. China KP145233 KP145169 KP145297 KP145201 KP145137 KP145265
CAUA42 Capsicum sp. China KP145234 KP145170 KP145298 KP145202 KP145138 KP145266
CAUA43 Capsicum sp. China KP145235 KP145171 KP145299 KP145203 KP145139 KP145267
CAUA44 Capsicum sp. China KP145236 KP145172 KP145300 KP145204 KP145140 KP145268
CAUA45 Capsicum sp. China KP145237 KP145173 KP145301 KP145205 KP145141 KP145269
CAUA46 Capsicum sp. China KP145238 KP145174 KP145302 KP145206 KP145142 KP145270
CAUA47 Capsicum sp. China KP145239 KP145175 KP145303 KP145207 KP145143 KP145271
CBS 120708 Capsicum sp. Thailand JQ948269 JQ948599 JQ948930 JQ949260 JQ949590 JQ949920
CBS 126529* Capsicum sp. Indonesia JQ948267 JQ948597 JQ948928 JQ949258 JQ949588 JQ949918
CBS 126530 Capsicum sp. Indonesia JQ948268 JQ948598 JQ948929 JQ949259 JQ949589 JQ949919
C. simmondsii CBS 122122* Carica sp. Australia JQ948276 JQ948606 JQ948937 JQ949267 JQ949597 JQ949927

* = Ex-type culture. Strains studied in this paper are in bold font.