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. 2016 Aug 2;38:20–37. doi: 10.3767/003158517X692788

Table 2c.

Strains used for the phylogenetic analysis of Colletotrichum species with curved conidia with details on host, location, and GenBank accession numbers.

Species Isolate Host Location GenBank accession numbers
ITS ACT TUB2 CHS-1 GAPDH HIS3
C. anthrisci CBS 125335 Anthriscus sylvestris Netherlands GU227846 GU227944 GU228140 GU228336 GU228238 GU228042
C. chlorophyti IMI 103806* Chlorophytum sp. India GU227894 GU227992 GU228188 GU228384 GU228286 GU228090
CBS 142.79 Stylosanthes hamata Australia GU227895 GU227993 GU228189 GU228385 GU228287 GU228091
C. circinans CBS 111.21 Allium cepa USA GU227854 GU227952 GU228148 GU228344 GU228246 GU228050
CBS 221.81* Allium cepa Serbia GU227855 GU227953 GU228149 GU228345 GU228247 GU228051
C. dematium CBS 125.25* Eryngium campestre France GU227819 GU227917 GU228113 GU228309 GU228211 GU228015
CBS 125340 Apiaceae Czech Republic GU227820 GU227918 GU228114 GU228310 GU228212 GU228016
C. fructi CBS 346.37* Malus sylvestris USA GU227844 GU227942 GU228138 GU228334 GU228236 GU228040
C. incanum ATCC 64682* Glycine max USA KC110789 KC110825 KC110816 KC110807 KC110798
IL6A Glycine max USA KC110787 KC110823 KC110814 KC110805 KC110796
IL9A Glycine max USA KC110788 KC110824 KC110815 KC110806 KC110797
CAUCT34 Capsicum sp. China KP145641 KP145505 KP145675 KP145539 KP145573 KP145607
C. lilii CBS 109214 Lilium sp. Japan GU227810 GU227908 GU228104 GU228300 GU228202 GU228006
C. lindemuthianum CBS 151.28 Lilium sp. Netherlands GU227800 GU227898 GU228094 GU228290 GU228192 GU227996
C. lineola CBS 125337* Apiaceae sp. Czech Republic GU227829 GU227927 GU228123 GU228319 GU228221 GU228025
CBS 125339 Apiaceae sp. Czech Republic GU227830 GU227928 GU228124 GU228320 GU228222 GU228026
C. liriopes CBS 119444* Lirope muscari Mexico GU227804 GU227902 GU228098 GU228294 GU228196 GU228000
CBS 122747 Lirope muscari Mexico GU227805 GU227903 GU228099 GU228295 GU228197 GU228001
C. phaseolorum 1 CBS 157.36 Phaseolus radiatus var. aureus Japan GU227896 GU227994 GU228190 GU228386 GU228288 GU228092
C. phaseolorum 2 CBS 158.36 Vigna sinensis Japan GU227897 GU227995 GU228191 GU228387 GU228289 GU228093
C. rusci CBS 119206* Ruscus sp. Italy GU227818 GU227916 GU228112 GU228308 GU228210 GU228014
C. spaethianum CBS 167.49* Hosta sieboldiana Germany GU227807 GU227905 GU228101 GU228297 GU228199 GU228003
CBS 100063 Lilium sp. South Korea GU227808 GU227906 GU228102 GU228298 GU228200 GU228004
CBS 101631 Hemerocallis sp. New Zealand GU227809 GU227907 GU228103 GU228299 GU228201 GU228005
C. spinaciae CBS 128.57 Spinacia oleracea Netherlands GU227847 GU227945 GU228141 GU228337 GU228239 GU228043
IMI 104607 Spinacia sp. Italy GU227850 GU227948 GU228144 GU228340 GU228242 GU228046
C. tofieldiae CBS 168.49 Lupinus polyphyllus Germany GU227802 GU227900 GU228096 GU228292 GU228194 GU227998
CBS 495.85 Tofieldia calyculata Switzerland GU227801 GU227899 GU228095 GU228291 GU228193 GU227997
C. trichellum CBS 118198 Hedera sp. Guatemala GU227813 GU227911 GU228107 GU228303 GU228205 GU228009
CBS 217.64 Hedera helix UK GU227812 GU227910 GU228106 GU228302 GU228204 GU228008
C. truncatum CBS 182.52 Glycine max USA GU227866 GU227964 GU228160 GU228356 GU228258 GU228062
CBS195.32 Glycine max USA GU227865 GU227963 GU228159 GU228355 GU228257 GU228061
CBS 345.70 Glycine max Denmark GU227867 GU227965 GU228161 GU228357 GU228259 GU228063
CBS 151.35* Phaseolus lunatus USA GU227862 GU227960 GU228156 GU228352 GU228254 GU228058
CAUCT1 Capsicum annuum China KP145608 KP145472 KP145642 KP145506 KP145540 KP145574
CAUCT2 Capsicum annuum China KP145609 KP145473 KP145643 KP145507 KP145541 KP145575
CAUCT3 Capsicum annuum China KP145610 KP145474 KP145644 KP145508 KP145542 KP145576
CAUCT4 Capsicum annuum China KP145611 KP145475 KP145645 KP145509 KP145543 KP145577
CAUCT5 Capsicum annuum China KP145612 KP145476 KP145646 KP145510 KP145544 KP145578
CAUCT6 Capsicum annuum China KP145613 KP145477 KP145647 KP145511 KP145545 KP145579
CAUCT7 Capsicum sp. China KP145614 KP145478 KP145648 KP145512 KP145546 KP145580
CAUCT8 Capsicum sp. China KP145615 KP145479 KP145649 KP145513 KP145547 KP145581
CAUCT9 Capsicum sp. China KP145616 KP145480 KP145650 KP145514 KP145548 KP145582
CAUCT10 Capsicum sp. China KP145617 KP145481 KP145651 KP145515 KP145549 KP145583
CAUCT11 Capsicum sp. China KP145618 KP145482 KP145652 KP145516 KP145550 KP145584
CAUCT12 Capsicum sp. China KP145619 KP145483 KP145653 KP145517 KP145551 KP145585
CAUCT13 Capsicum sp. China KP145620 KP145484 KP145654 KP145518 KP145552 KP145586
CAUCT14 Capsicum sp. China KP145621 KP145485 KP145655 KP145519 KP145553 KP145587
CAUCT15 Capsicum sp. China KP145622 KP145486 KP145656 KP145520 KP145554 KP145588
CAUCT16 Capsicum sp. China KP145623 KP145487 KP145657 KP145521 KP145555 KP145589
CAUCT17 Capsicum sp. China KP145624 KP145488 KP145658 KP145522 KP145556 KP145590
CAUCT18 Capsicum sp. China KP145625 KP145489 KP145659 KP145523 KP145557 KP145591
CAUCT19 Capsicum sp. China KP145626 KP145490 KP145660 KP145524 KP145558 KP145592
CAUCT20 Capsicum sp. China KP145627 KP145491 KP145661 KP145525 KP145559 KP145593
CAUCT21 Capsicum sp. China KP145628 KP145492 KP145662 KP145526 KP145560 KP145594
CAUCT22 Capsicum sp. China KP145629 KP145493 KP145663 KP145527 KP145561 KP145595
CAUCT23 Capsicum sp. China KP145630 KP145494 KP145664 KP145528 KP145562 KP145596
CAUCT24 Capsicum sp. China KP145631 KP145495 KP145665 KP145529 KP145563 KP145597
CAUCT25 Capsicum sp. China KP145632 KP145496 KP145666 KP145530 KP145564 KP145598
CAUCT26 Capsicum sp. China KP145633 KP145497 KP145667 KP145531 KP145565 KP145599
CAUCT27 Capsicum sp. China KP145634 KP145498 KP145668 KP145532 KP145566 KP145600
CAUCT28 Capsicum sp. China KP145635 KP145499 KP145669 KP145533 KP145567 KP145601
CAUCT29 Capsicum sp. China KP145636 KP145500 KP145670 KP145534 KP145568 KP145602
CAUCT30 Capsicum sp. China KP145637 KP145501 KP145671 KP145535 KP145569 KP145603
CAUCT31 Capsicum sp. China KP145638 KP145502 KP145672 KP145536 KP145570 KP145604
CAUCT32 Capsicum sp. China KP145639 KP145503 KP145673 KP145537 KP145571 KP145605
CAUCT33 Capsicum sp. China KP145640 KP145504 KP145674 KP145538 KP145572 KP145606
CAUCT33 Capsicum sp. China KP145640 KP145504 KP145674 KP145538 KP145572 KP145606

* = Ex-type culture. Strains studied in this paper are in bold