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. 2017 Oct 17;8:965. doi: 10.1038/s41467-017-01013-5

Fig. 3.

Fig. 3

A close up view of the unmodified dG and 10S (+)-trans-BP-N 2-dG adduct contacts with Rev1. a The template dG in the unmodified complex (PDB ID: 2AQ4)35. The backbone amines of Met685 and Gly686 form direct hydrogen bonds with the base of the dG. Side chains of residues Asp399, Trp417, Lys681 and Gly415 and the backbone amine of Lys681 form water-mediated contacts with the base. b The 10S (+)-trans-BP-N 2-dG contacts with Rev1. The modified dG maintains hydrogen bonds between the N7 and O 6 atoms at its “Hoogsteen edge” and the main-chain amides of Met685 and Gly686 of the G loop. However, water-mediated contacts with Asp399, Trp417, Lys681, and Gly415 are lost. A molecule of glycerol (shown in gray) appears to take the place of some of the water molecules observed in the unmodified structure (a)