Table 1.
Species | Short description of species | Median total length (Mb) | Median gene count | Median protein count | Median GC% | Accession number | Depositor or source | |
---|---|---|---|---|---|---|---|---|
1 | Leptotrichia buccalis | This Gram-negative rod is a member of the normal human oral microbial community but has occasionally been implicated in cases of septicemia and endocarditis | 2.46561 | 2,309 | 2,182 | 29.6 | NC_013192 | JGI-PGF |
2 | Leptotrichia goodfellowii | The species contain Gram-negative anaerobic rods isolated from human sources (blood) | 2.28422 | 2,199 | 2,079 | 31.55 | AZXW00000000 | JGI-PGF |
3 | Leptotrichia hofstadii | Gram-negative, non-spore-forming, non-motile rods isolated from the saliva of a healthy person | 2.50859 | 2,413 | 2,156 | 30.65 | AUAY00000000 | JGI-PGF |
4 | Leptotrichia shahii | Gram-negative, non-spore-forming, non-motile rods isolated from a gingivitis patient | 2.14461 | 1,982 | 1,888 | 29.5 | ARDD00000000 | JGI-PGF |
5 | Leptotrichia trevisanii | Gram-negative, aerobic, non-spore-forming, non-motile rods, isolated from blood of a patient with acute myeloid leukemia | 2.85336 | 2,648 | 2,500 | 30.4 | AXVL00000000 | JGI-PGF |
6 | Leptotrichia wadei | Gram-negative rods, facultative, non-motile, non-spore-forming, isolated from saliva of a healthy person | 2.35345 | 22,115 | 2,069 | 29.3 | ARDS00000000 | JGI-PGF |
7 | Leptotrichia sp. oral taxon 879 str. F0557 | Isolates from a population of Leptotrichia, clearly distinct from currently recognized species. Tentatively designated at the species level. Unnamed isolates have not yet been characterized using traditional methods, and the species name has not yet been validly published. | 2.41575 | 2,293 | 2,177 | 29.7 | AWVL00000000 | NCBI |
8 | Leptotrichia sp. oral taxon 215 str. W9775 | Isolates from a population of Leptotrichia, clearly distinct from currently recognized species. Tentatively designated at the species level. Unnamed isolates have not yet been characterized using traditional methods, and the species name has not yet been validly published. | 2.30849 | 2,158 | 2,052 | 31.4 | AWVR01000000 | NCBI |
9 | Leptotrichia sp. Marseille-P3007 | Leptotrichia massiliensis was isolated from sputum in a healthy patient as part of a ‘culturomics’ study aiming at cultivating all bacteria in human stool | 2.53864 | 2,388 | 2,307 | 29.7 | NZ_FNVZ00000000 | NCBI |
10 | Leptotrichia sp. oral taxon 212 str. W10393 | Isolates from a population of Leptotrichia, clearly distinct from currently recognized species. Tentatively designated at the species level. Unnamed isolates have not yet been characterized using traditional methods, or the species name has not yet been validly published. | 2.4449 | 2,289 | 2,159 | 31.4 | CP012410 | NCBI |
11 | Leptotrichia sp. oral taxon 847 str.F0260 | Isolates from a population of Leptotrichia, clearly distinct from currently recognized species. Tentatively designated at the species level. Unnamed isolates have not yet been characterized using traditional methods, or the species name has not yet been validly published. | 2.19494 | 2,070 | 1,939 | 29.8 | CP014231 | NCBI |
12 | Leptotrichia sp. oral taxon 225 str. F0581 | Isolates from a population of Leptotrichia, clearly distinct from currently recognized species. Tentatively designated at the species level. Unnamed isolates have not yet been characterized using traditional methods, and the species name has not yet been validly published. | 2.40008 | 2,248 | 2,155 | 29.6 | AWVS00000000 | NCBI |
Table adopted and modified from Gupta et al. [100].
JGI-PGF, US DOE Joint Genome Institute; NCBI, www.ncbi.nlm.nih.gov/genome/genomes/14961?