Table II.
416 genes for analysis.
| ABCC2 | DMNT3A | KDR | RAF1 |
|---|---|---|---|
| ACTB | DNM2 | KIF1B | RARA |
| ADH1B | DOCK1 | KIT | RASGEF1A |
| AIP | DOT1L | KMT2B | RB1 |
| AKT1 | DPYD | KMT2C | RECQL4 |
| AKT2 | DUSP2 | KRAS | RELN |
| AKT3 | EBF1 | LEF1 | RET |
| ALDH2 | ECT2L | LMO1 | RHBDF2 |
| ALK | EED | LSP1 | RHOA |
| AMER1 | EGFR | LYN | RICTOR |
| AP3B1 | EGR1 | LYST | RNF146 |
| APC | EP300 | LZTR1 | RNF43 |
| AR | EPCAM | MAP2K1 | ROS1 |
| ARAF | EPHA3 | MAP2K2 | ROS1 |
| ARID1A | ERBB2 | MAP2K4 | RPTOR |
| ARID2 | ERBB3 | MAP3K1 | RRM1 |
| ARID5B | ERBB4 | MCL1 | RUNX1 |
| ASXL1 | ERCC1 | MDM2 | SBDS |
| ATM | ERCC2 | MDM4 | SDHA |
| ATR | ERCC3 | MECOM | SDHAF2 |
| ATRX | ERCC4 | MED12 | SDHB |
| AURKA | ERCC5 | MEF2B | SDHC |
| AURKB | ESR1 | MEN1 | SDHD |
| AXIN1 | ETV1 | MET | SERP2 |
| AXL | ETV4 | MGMT | SETBP1 |
| B2M | EWSR1 | MITF | SETD2 |
| BAP1 | EXT1 | MLH1 | SF3B1 |
| BARD1 | EXT2 | MLL | SGK1 |
| BAT3 | EZH2 | MLLT10 | SH2D1A |
| BCL2 | FANCA | MLPH | SLX4 |
| BCL2L1 | FANCB | MPL | SMAD2 |
| BCL2L2 | FANCC | MRE11A | SMAD3 |
| BCORL1 | FANCD2 | MSH2 | SMAD4 |
| BIM(BCL2L11) | FANCE | MSH3 | SMAD7 |
| BLM | FANCF | MSH6 | SMARCA4 |
| BMPR1A | FANCG | MTHFR | SMARCB1 |
| BRAF | FANCI | MTOR | SMC1A |
| BRCA1 | FANCL | MUTYH | SMC3 |
| BRCA2 | FANCM | MYC | SMO |
| BRD4 | FAT1 | MYCL1 | SOX2 |
| BRIP1 | FBXO11 | MYCN | SPOP |
| BTG2 | FCGR2B | MYD88 | SRC |
| BTK | FGF19 | MYNN | SRSF2 |
| BTLA | FGFR1 | NBN | STAG2 |
| BUB1B | FGFR2 | NCSTN | STAT3 |
| c11orf30 | FGFR3 | NF1 | STAT5A |
| CALR | FGFR4 | NF2 | STAT5B |
| CBL | FH | NFKBIA | STIL |
| CCND1 | FIP1L1 | NKX2-1 | STK11 |
| CCNE1 | FLCN | NOTCH1 | STMN1 |
| CCT6B | FLT1 | NOTCH2 | STX11 |
| CD22 | FLT3 | NPM1 | STXBP2 |
| CD274 | FLT4 | NQO1 | SUFU |
| CD58 | GADD45B | NRAS | SUZ12 |
| CD70 | GATA1 | NRG1 | SYN3 |
| CDA | GATA2 | NSD1 | TCN2 |
| CDC73 | GATA3 | NT5C2 | TEK |
| CDH1 | GATA4 | NTRK1 | TEKT4 |
| CDK10 | GATA6 | PAG1 | TERC |
| CDK12 | GNA11 | PAK3 | TERT |
| CDK4 | GNA13 | PALB2 | TET2 |
| CDK6 | GNAQ | PARK2 | TGFBR2 |
| CDK8 | GNAS | PAX5 | TLE1 |
| CDKN1B | GPC3 | PBRM1 | TLE4 |
| CDKN1C | GRIN2A | PC | TMEM127 |
| CDKN2A | GRM3 | PDCD1 | TMPRSS2 |
| CDKN2B | GSTM1 | PDCD1LG2 | TNFAIP3 |
| CDKN2C | GSTP1 | PDGFRA | TNFRSF14 |
| CEBPA | GSTT1 | PDGFRB | TNFRSF17 |
| CEP57 | HBA1 | PDK1 | TNFRSF19 |
| CHD4 | HBA2 | PHF6 | TOP1 |
| CHEK1 | HBB | PHOX2B | TOP2A |
| CHEK2 | HDAC1 | PICK3R1 | TP53 |
| CKS1B | HDAC2 | PIK3C3 | TP63 |
| CREBBP | HDAC4 | PIK3CA | TPMT |
| CRKL | HDAC7 | PIK3CD | TRAF2 |
| CROT | HGF | PIK3R1 | TRAF3 |
| CSF1R | HNF1A | PIK3R2 | TRAF5 |
| CSF3R | HNF1B | PLCE1 | TSC1 |
| CTCF | HRAS | PLK1 | TSC2 |
| CTLA4 | ID3 | PMS1 | TSHR |
| CTNNB1 | IDH1 | PMS2 | TTF1 |
| CUX1 | IDH2 | POLD1 | TUBB3 |
| CXCR4 | IGF1R | POLD3 | TYMS |
| CYLD | IGF2 | POLE | TYR |
| CYP2B6*6 | IKBKE | POT1 | U2AF1 |
| CYP2B6*6 | IKZF1 | PPP2R1A | UGT1A1 |
| CYP2C19*2 | IKZF2 | PRDM1 | UNC13D |
| CYP2C9*3 | IKZF3 | PRF1 | VEGFA |
| CYP2D6 | IL13 | PRKAR1A | VHL |
| CYP2D6*3 | IL7R | PRKCI | WISP3 |
| CYP2D6*4 | INPP4B | PTCH1 | WRN |
| CYP2D6*6 | INPP5D | PTEN | WT1 |
| CYP3A4*4 | IRF1 | PTPN11 | XIAP |
| CYP3A5*3 | IRF2 | PTPN2 | XPA |
| DAB2 | IRF4 | PTPN6 | XPC |
| DAXX | IRF8 | PTPRO | XPO1 |
| DDB2 | JAK1 | QKI | XRCC1 |
| DDR2 | JAK2 | RAC1 | YAP1 |
| DDX1 | JAK3 | RAD21 | ZAP70 |
| DHFR | JARID2 | RAD50 | ZBTB20 |
| DICER1 | JUN | RAD51 | ZNF217 |
| DIS3L2 | KDM2B | RAD51C | ZNF703 |
| DLG2 | KDM5A | RAD51D | ZRSR2 |