Table 3.1.
Prevalent mutations
|
|||||||
---|---|---|---|---|---|---|---|
Region | AF (%) | Protein | Nucleotide | RS | Exon | Type | Domain |
Europe | |||||||
Austria (Ferenci, 2006) | 34.1 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
6.4 | p.Gly710Ser | c.2128G>A | 8 | Missense | TM2 | ||
3.6 | p.Met769fs | c.2298_2299insC | rs137853287 | 8 | Premature stop | TM4 | |
Benelux (Ferenci, 2006) | 53 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
Bulgaria (Todorov et al., 2005) | 58.8 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
Canary Islands (García Villarreal et al., 2000) | 64 | p.Leu708Pro | c.2123 T>C | 8 | Missense | TM2 | |
Czech Republic (Vrabelova et al., 2005) | 57 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
Denmark (Møller et al., 2011) | 18 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
16 | p.Trp779* | c.2336G>A | rs137853283 | 8 | Nonsense | TM4 | |
France (Bost et al., 2012) | 15 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
Germany (Ferenci, 2006) | 47.9 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
Germany (East, former) (Caca et al., 2000) | 63 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
Greece (Panagiotakaki et al., 2004; | 35 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
Dedoussis et al., 2005; Gomes and Dedoussis, 2016) | |||||||
12 | p.Arg969Gln | c.2906G>A | rs774028495 | 13 | Missense | TM6 | |
Hungary (Firneisz et al., 2002; Folhoffer et al., 2007) | 42.9 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
Iceland (Thomas et al., 1995a; Hofer et al., 2012) | 100 | p.Tyr670* | c.2007_2013del | 7 | Nonsense | TM1 | |
Italy (Loudianos et al., 1999) | 17.5 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
9 | p.Val845fs | c.2530delA | rs755709270 | 10 | Premature stop | Td | |
6 | p.Met769fs | c.2298_2299insC | rs137853287 | 8 | Premature stop | TM4 | |
Netherlands (Stapelbroek et al., 2004) | 33 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
Poland (Gromadzka et al., 2005) | 72 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
7.3 | p.Ala1135fs | c.3400delC | rs137853281 | 15 | Premature stop | ATP loop | |
3.7 | p.Gln1351* | c.4051C>T | 20 | Nonsense | |||
Romania (Iacob et al., 2012) | 38.1 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
Russia (Ivanova-Smolenskaya et al., 1997) | 49 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
Sardinia (Figus et al., 1995) | 60.5 | c.-441_-427del | 5prime | Unknown | Promoter | ||
8.5 | p.Met822fs | c.2463delC | 10 | Deletion | TM4/Td | ||
7.9 | p.Val1146Met | c.3436G>A | 16 | Missense | ATP loop | ||
Serbia | 38.4 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
(Tomić et al., 2013) | |||||||
11.6 | p.Met769fs | c.2304dupC | 8 | Missense | TM4 | ||
9.3 | p.Ala1003Thr | c.3007G>A | rs1801247 | 13 | Missense | TM6/Ph | |
Spain (Margarit et al., 2005) | 27 | p.Met645Arg | c.1934 T>G | rs121907998 | 6 | Missense | Cu6/TM1 |
Sweden (Shah et al., 1997) | 38 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
Turkey (Ferenci, 2006; Simsek Papur et al., 2013) | 17.4 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
5.3 | p.Gly710Ser | c.2128G>A | rs772595172 | 8 | Missense | TM2 | |
4.53 | p.Gln457* | c.1369C>T | 3 | Nonsense | Cu4/Cu5 | ||
UK (Coffey et al., 2013) | 19 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
8 | p.Met769Val | c.2305A>G | 8 | Missense | TM4 | ||
Yugoslavia (former) (Loudianos et al., 1999) | 48.9 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
11.4 | p.Met769fs | c.2298_2299insC | rs137853287 | 8 | Premature stop | TM4 | |
Asia | |||||||
China (Gu et al., 2003; Z.-Y. Wu et al., 2003; Wang et al., 2011; Wei et al., 2014) | 31 | p.Arg778Leu | c.2332C>T | rs28942074 | 8 | Missense | TM4 |
10 | p.Pro992Leu | c.2975C>T | rs201038679 | 13 | Missense | TM6/Ph | |
9.6 | p.Ile1148Thr | c.3443 T>C | rs60431989 | 16 | Missense | ATP loop | |
3.3 | p.Thr935Met | c.2804C>T | 12 | Missense | TM5 | ||
19 | p.Arg778Leu | c.2332C>T | rs28942074 | 8 | Missense | TM4 | |
North India (S. Kumar et al., 2006; Gupta et al., 2007) | |||||||
12 | p.Ile1102Thr | c.3305 T>C | rs560952220 | 15 | Missense | ATP loop | |
9 | p.Pro992His | c.2975C>A | 13 | Missense | TM6/Ph | ||
South India (Santhosh et al., 2006; S. S. Kumar et al., 2012) | 11 | p.Ala1003Val | c.3008C>T | 13 | Missense | TM6/Ph | |
11 | p.Cys271* | c.813C>A | rs572147914 | 2 | Nonsense | Cu3 | |
9 | p.Pro768Leu | c.2303C>T | 8 | Missense | TM4 | ||
9 | p.Arg969Gln | c.2906G>A | rs121907996 | 13 | Missense | TM6 | |
East India (Gupta et al., 2005) | 16 | p.Cys271* | c.813C>A | rs572147914 | 2 | Nonsense | Cu3 |
11 | p.Gly1061Glu | c.3182G>A | 14 | Missense | ATP loop | ||
8.5 | c.1708-1G>C | rs137853280 | 5 | Splice | Cu6 | ||
West India (Aggarwal and Bhatt, 2013; Aggarwal et al., 2013) | 20 | p.Cys271* | c.813C>A | rs572147914 | 2 | Nonsense | Cu3 |
11 | p.Glu122fs | c.365_366delins | 2 | Ins/Del | Cu1 | ||
TTCGAAGC | |||||||
6 | p.Thr977Met | c.2930C>T | rs72552255 | 13 | Missense | TM6 | |
6 | p.Leu795Phe | c.2383C>T | 9 | Missense | TM4/Td | ||
Japan (Okada et al., 2000; Tatsumi et al., 2010) | 17.95 | p.Asn958fs | c.2871delC | 13 | Premature stop | TM5/TM6 | |
16.7 | p.Arg778Leu | c.2332C>T | rs28942074 | 8 | Missense | TM4 | |
10.5 | c.1708-5 T>G | 5 | Splice | Cu6 | |||
Korea (E. K. Kim et al., 1998; Yoo, 2002; G.-H. Kim et al., 2008; Song et al., 2012) | 37.9 | p.Arg778Leu | c.2332C>T | rs28942074 | 8 | Missense | TM4 |
12.1 | p.Asn1270Ser | c.3809A>G | rs121907990 | 18 | Missense | ATP hinge | |
9.4 | p.Ala874Val | c.2621C>T | rs376355660 | 11 | Missense | TM5 | |
8 | p.Leu1083Phe | c.3247C>T | 15 | Missense | ATP loop | ||
Lebanon (Usta et al., 2014) | 44.7 | p. Ala1003Thr | c.2299insC | rs137853287 | 8 | Missense | TM4 |
Saudi Arabia (Al Jumah et al., 2004; Majumdar et al., 2004) | 32 | p.Gln1399Arg | c.4196A>G | 21 | Missense | After TM8 | |
16 | p.Ser774Arg | c.2230 T>C | rs535217574 | 21 | Missense | TM3 | |
Taiwan (Lee et al., 2000; Wan et al., 2006) | 29.6 | p.Arg778Leu | c.2332C>T | rs28942074 | 8 | Missense | TM4 |
8.9 | p.Pro992Leu | c.2975C>T | rs201038679 | 13 | Missense | TM6 | |
4.8 | p.Gly943Asp | c.2828G>A | 12 | Missense | TM5 | ||
Thailand (Panichareon et al., 2011) | 10.52 | p.Arg778Leu | c.2332C>T | rs28942074 | 8 | Missense | TM4 |
7.89 | p.Leu1371Pro | c.4112 T>C | 20 | Missense | TM8 | ||
Iran (Zali et al., 2011) | 19 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
Africa | |||||||
Egypt (Abdelghaffar et al., 2008; Abdel Ghaffar et al., 2011) | 42.2 | IVS18+6 T>C | c.3903+6C>T | rs2282057 | 18 | Splice | |
40.6 | p.Ala11140Val | c.3419C>T | 16 | Missense | ATP loop | ||
26.5 | p.Lys832Arg | c.2495A>G | rs1061472 | 10 | Missense | TM4/Td | |
Americas | |||||||
USA (Kuppala et al., 2009) | 40.3 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
1.9 | p.Asn1270Ser | c.3809A>G | rs121907990 | 18 | Missense | ATP hinge | |
1.9 | p.Gly1266Arg | c.3796G>A | rs121907992 | 18 | Missense | ATP hinge | |
Brazil (Deguti et al., 2004; Machado et al., 2008; Bem et al., 2013) | 37.1 | p.His1069Gln | c.3207C>A | rs76151636 | 14 | Missense | ATP loop |
31.25 | p.Ala1135fs | c.3400delC | rs137853281 | 15 | Premature stop | ATP loop | |
11.4 | p.Ala1135GlnfsX13 | c.3402delC | rs137853281 | 15 | Premature stop | ATP loop | |
p.Leu708Pro | c.2123 T>C | 8 | Missense | TM2 | |||
Costa Rica (Shah et al., 1997) | 61 | p.Asn1270Ser | c.3809A>G | rs121907990 | 18 | Missense | ATP hinge |
Venezuela (Paradisi et al., 2015) | 26.9 | p.Ala1135GlnfsX13 | c.3402delC | rs137853281 | 15 | Premature stop | ATP loop |
9.6 | p.Gly691Arg | c.2071G>A | 7 | Missense | TM2 |
AF, RS,