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. Author manuscript; available in PMC: 2018 Oct 15.
Published in final edited form as: Arch Biochem Biophys. 2017 May 31;632:47–58. doi: 10.1016/j.abb.2017.05.017

Scheme 8.

Scheme 8

Mechanistic studies with fluoromethyl IPP/DMAPP analogues. Compounds 16-18 are isomerized by IDI-2 at rates much slower than the native substrate (IPP) – paralleling the reactivity trends seen in the hydrolysis of 19, which is believed to proceed by an SN1 mechanism through a 3°cationic intermediate. This data is consistent with the formation of a carbocation intermediate or cation-like transition state in the IDI-2 catalyzed reaction.