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. 2017 Oct 16;8:1670. doi: 10.3389/fpls.2017.01670

Table 7.

Common useful and limited properties for quantitative techniques used for GMO diagnostics.

Technologies Advantages Limitations Reference
rtPCR Faster, highly specific, allow multiplexing and permit quantification One marker per reaction Broeders et al., 2012; Navarro et al., 2015
CGE Specificity, sensitivity, multiplexing and quantification a, higher resolution power to clearly detect PCR products from a multiplex assay Extensive labor for primer design and optimization, specialized apparatus is required Heide et al., 2008b; Milavec et al., 2014; Vega and Marina, 2014; Fraiture et al., 2015
LAMP Required simple devices, time-efficiency, ability to withstand different PCR inhibitors Four primers per sequence Zhang et al., 2012; Angers-Loustau et al., 2014; Cheng et al., 2014
dPCR Multiplexing, flexibility, absolute detection of target copy number, accurate estimation of target at low copy number Relatively expensive Hindson et al., 2011; Sanders et al., 2011; Milavec et al., 2014
Microarray Miniaturization, multiplexing, high-throughput screening Difficulties in prove designing, data processing is laborious Pla et al., 2012; Randhawa et al., 2016
NGS No prior sequence information is required, high accuracy, direct sample identification, time-efficiency Relatively expensive, requires sophisticated devices, data analysis issues Buermans and Den Dunnen, 2014; Randhawa et al., 2016; Willems et al., 2016

rtPCR, real time PCR; CGE, capillary gel electrophoresis; LAMP, loop mediated isothermal amplification; dPCR, digital PCR; NGS, next generation sequencing.