Table 3.

Overlapping regions enriched for both SZ and BD association in the EA population

Chromosome Region*	P value (EA SZ)	p value (EZ BD)	example of genes involved with SNPs showing association p<0.005
2q32.3_2	1.98E-03	3.10E-04	TMEFF2, PCGEM1,
3p21.1_1	<1.00E-05	<1.00E-05	GNL3, ITIH3-ITIH4, CACNA1D, CACNA2D3, PBRM1, NT5DC2,
6p22.1_1	<1.00E-05	5.40E-04	MHC gene family, HIST1H1B, HIST1H2BL,
6p22.1_2	<1.00E-05	<1.00E-05	MHC gene family, PGBD1, ZNF311, ZSCAN23, GABBR1, MOG,
6p21.33	<1.00E-05	<1.00E-05	MHC gene family, ABCF1, DDR1, DPCR1, GTF2H4, HCP5, MICB, VARS2
6p21.32	<1.00E-05	<1.00E-05	MHC gene family, NOTCH4, PSMB9,
7p22.3_2	1.80E-04	8.00E-05	MAD1L1, PRKAR1B, PDGFA,
8q24.3_4	1.11E-03	6.40E-04	JRK, TSNARE1,
19q13.33_1/2**	1.31E-03	5.30E-04	IZUMO1, RASIP1, PRRG2, NOSIP

^*the extra number after the dash indicates the 2-million bp moving window index.

^**9q13.33_1 is enriched for SZ and 19q13.33_2 is enriched for BD, these two regions overlap.