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. 2017 Sep 30;13(9):284–292. doi: 10.6026/97320630013284

Table 1. Docking summary of pG4DNA (1NP9) with 208 currently known GLTs.

Compound No. Compounds CAS No. Estimate rG (kcal/mol) Estimate average Ki (nM)
1 GA A 81907-62-2 -8.76 376.92
2 GA AM1 149507-55-1 -9.79 66.95
3 GA AP 120462-50-2 -9.44 121.01
4 GA AP2 1082416-00-9 -8.09 1,170
5 GA AP3 1082416-03-2 -9.57 97.06
6 GA B 81907-61-1 -8.46 633.32
7 GA B8 105817-07-0 -9.34 141.46
8 GA B9 - -8.95 274.61
9 GA C2 103773-62-2 -8.93 282.57
10 GA C5 673460-24-7 -9.41 126.81
11 GA C6 105742-76-5 -7.51 3,130
12 GA D 108340-60-9 -8.89 305.82
13 GA D1 - -9 254.25
14 GA D2 97653-94-6 -9.23 171.1
15 GA Df 1352033-73-8 -10.72 13.97
16 GA DM 173075-45-1 -9 254.56
17 GA E 98665-14-6 -9.96 50.39
18 GA F 98665-15-7 -9.07 226.16
19 GA G 98665-22-6 -8.54 545.63
20 GA GS-1 1206781-64-7 -8.67 444.3
21 GA GS-2 1206781-65-8 -8.76 379.65
22 GA GS-3 1206781-66-9 -7.86 1,740
23 GA H 98665-19-1 -7.05 6,770
24 GA I 98665-20-4 -9.16 192.28
25 GA J 100440-26-4 -9.48 112.35
26 GA Ja 112430-67-8 -8.87 314.29
27 GA Jb 112430-68-9 -8.95 273.93
28 GA K 104700-95-0 -8.4 696.77
29 GA L 102607-24-9 -9.54 101.48
30 GA LM2 508182-41-0 -8.39 713.51
31 GA M 110311-47-2 -9.36 138.4
32 GA Ma 108026-89-7 -6.17 30,240
33 GA Mb 108026-90-0 -6.89 8,900
34 GA Mc 108026-91-1 -7.07 6,610
35 GA Md 108026-92-2 -6.53 16,330
36 GA Me 108026-93-3 -7.09 6,350
37 GA Mf 108026-94-4 -8.77 369.98
38 GA Mg 110042-11-0 -7.18 5,430
39 GA Mh 110024-17-4 -7.04 6,900
40 GA Mi 110024-16-3 -8.03 1,290
41 GA Mj 110024-15-2 -7.19 5,360
42 GA Mk 110024-14-1 -7.97 1,440
43 GA N 110241-19-5 -9.2 181.04
44 GA O 110241-21-9 -10.12 38.28
45 GA P 112667-14-8 -7.3 4,450
46 GA R 103963-39-9 -7.46 3,410
47 GA S 104759-35-5 -8.78 369.21
48 GA SZ 865543-37-9 -8.99 255.68
49 GA T 103992-91-2 -5.73 62,870
50 GA TN 112430-64-5 -7.67 2,400
51 GA TR 862893-75-2 -9.14 199.55
52 GA TR1 1225286-05-4 -9.32 148.21
53 GA T-Q 112430-66-7 -8.1 1,160
54 GA U 86377-51-7 -8 1,360
55 GA V 86377-50-6 -7.29 4,570
56 GA V1 150033-91-3 -8.55 542.99
57 GA W 86377-49-3 -6.75 11,270
58 GA X 86377-53-9 -7.97 1,440
59 3-β-hydroxy GA X - -7.86 1,730
60 GA Y 86377-52-8 -8.49 602.92
61 GA Z 86420-19-1 -8.18 1,020
62 GA α 220181-81-7 -7.65 2,460
63 GA β 217476-76-1 -8.46 631.78
64 GA γ 294674-00-3 -8.83 338.2
65 GA δ 294674-02-5 -8.96 272.38
66 GA ε 294674-05-8 -8.83 338.29
67 GA ζ 294674-09-2 -10.16 35.86
68 GA η 294674-12-7 -8.2 979.27
69 GA θ 294674-15-0 -8.77 370.79
70 Ganodermic acid S 112430-63-4 -7.7 2,290
71 Ganodermic acid T-O 112430-65-6 -8.59 507.25
72 Ganoderenic acid A 100665-40-5 -8.69 426.02
73 Ganoderenic acid A - -9.49 111.51
74 Ganoderenic acid B 100665-41-6 -6.89 8,860
75 Ganoderenic acid C 100665-42-7 -6.89 8,910
76 Ganoderenic acid D 100665-43-8 -7.17 5,590
77 Ganoderenic acid E 110241-23-1 -6.8 10,380
78 Ganoderenic acid F 120462-47-7 -7.63 2,550
79 Ganoderenic acid G 120481-73-4 -7.71 2,230
80 Ganoderenic acid H 120462-48-8 -7.54 2,970
81 Ganoderenic acid I 120462-49-9 -7.35 4,120
82 Ganoderenic acid K 942950-94-9 -7.72 2,180
83 Methyl GA A 81907-63-3 -9.1 214.48
84 Methyl GA AP 120462-52-4 -8.94 280.93
85 Methyl GA B 81907-65-5 -7.8 1,910
86 Methyl GA D 97210-12-3 -9.07 225.56
87 Methyl GA Df 1351348-00-9 -10.28 29.18
88 Methyl GA DM - -8.51 573.98
89 Methyl GA E 98718-43-5 -9.58 95.72
90 Methyl GA F 98665-08-8 -9.97 49.26
91 Methyl GA G 98665-23-7 -8.56 531.94
92 Methyl GA H 98665-11-3 -7.1 6,220
93 Methyl GA I 98683-73-9 -8.15 573.68
94 Methyl GA K 110414-79-4 -9.17 189.33
95 Methyl GA K2003 105742-77-6 -8.86 318.33
96 Methyl Ganoderenic acid H 120462-54-6 -7.25 4,860
97 Methyl Ganoderenic acid I 120462-53-5 -7.18 5,480
98 Ethyl GA F 1245946-63-7 -10.16 35.97
99 Propyl GA F - -10.27 29.47
100 i-Propyl GA F - -10.14 36.96
101 Butyl GA F - -10.09 40.43
102 i-Butyl GA F - -10.34 26.23
103 s-Butyl GA F - -9.27 75.21
104 t-Butyl GA F - -10.17 35.18
105 Butyl GA A 1207106-19-1 -9.41 126.76
106 Butyl GA B 1207106-20-4 -8.46 634.33
107 Tri-OAc Ganodermatriol 1028449-54-8 -9.21 176.11
108 Ganodermatriol M - -9.31 150.67
109 3-OAc GA B - -8.47 619.16
110 12-hydroxy GA C2 942936-52-9 -8.99 256.31
111 12-α-hydroxy GA D - -9.94 51.72
112 12-α-OAc GA D 942936-55-2 -9.84 61.51
113 15-OAc Ganolucidic acid E 1309931-94-9 -7.64 2,500
114 12-hydroxy GA F - -10.29 28.49
115 20-hydroxy GA G 400604-12-8 -9.76 70.07
116 3-OAc GA K - -8.79 358.12
117 3-OAc GA H 942936-56-3 -7.07 6,570
118 7-methyl GA O 112667-15-9 -7.3 4,490
119 7-ethyl GA O - -6.32 23,130
120 15-hydroxy GA S - -9.07 223.84
121 23-hydroxy GA S 1225286-07-6 -8.7 422.67
122 7-carbonyl GA Z - -8.36 742.06
123 7-carbonyl methyl GA Z - -7.83 1,820
124 2-OAc methyl GA A 81907-64-4 -7.53 3,030
125 7-hydroxy methyl GA AP 120481-75-6 -9.1 214.81
126 Me89GA J 400604-11-7 -9.65 84.48
127 Lucidenic acid A 95311-94-7 -8.31 807.65
128 Lucidenic acid B 95311-95-8 -8.2 981.84
129 Lucidenic acid C 95311-96-9 -7.51 3,130
130 Lucidenic acid D 98665-16-8 -9.1 212.66
131 Lucidenic acid D1 97653-95-7 -9.01 250.71
132 Lucidenic acid E 98665-17-9 -8.57 523.96
133 Lucidenic acid E1 97673-89-7 -8.24 911.36
134 Lucidenic acid F 98665-18-0 -9.05 231.93
135 Lucidenic acid G 102607-21-6 -8.09 1,180
136 Lucidenic acid H 110241-25-3 -7.71 2,230
137 Lucidenic acid I 110241-27-5 -9.54 101.02
138 Lucidenic acid J 110241-29-7 -8.7 422.78
139 Lucidenic acid K 110241-31-1 -8.86 318.4
140 Lucidenic acid L 110267-45-3 -8.46 633.21
141 Lucidenic acid M 110241-33-3 -8 1,370
142 Lucidenic acid O 250643-33-5 -7.49 3,250
143 Lucidenic acid P 648430-31-3 -7.32 4,310
144 Lucidenic acid SP1 364622-33-3 -7.77 2,030
145 20deHLA A 852396-69-7 -7.57 2,800
146 20deHLA N 1206781-67-0 -7.39 3,860
147 20OHLA A 1206781-68-1 -8.25 894.69
148 20OHLA D2 852936-71-1 -8.88 310.28
149 20OHLA E2 852567-75-0 -8.71 411.51
150 20OHLA F 852567-72-7 -9.16 192.27
151 20OHLA N 852567-78-3 -8.16 1,040
152 20OHLA P 852567-80-7 -7.74 2,130
153 LAlactone 250643-34-6 -6.91 8,640
154 Lucideraldehyde A 420781-84-6 -7.79 1,960
155 Lucideraldehyde B 480439-84-7 -8.41 687.6
156 Lucideraldehyde C 252351-96-5 -8.45 644.96
157 Lucideraldehyde D 873061-78-0 -8.29 837.72
158 Ganolucidic acid A 98665-21-5 -9.77 69.51
159 Ganolucidic acid B 98683-75-1 -9.42 123.9
160 Ganolucidic acid C 100440-27-5 -8.77 370.2
161 Ganolucidic acid D 102607-22-7 -9.16 193.85
162 Ganolucidic acid E 114567-50-9 -9.05 234.28
163 Ganosporic acid A 135357-25-4 -9.66 83.46
164 trideOAcGA_T 116763-90-7 -8.52 571.65
165 MeLA A 105742-79-8 -7.24 4,910
166 MeLA C 98094-88-3 -8.17 1,020
167 MeLA D2 98665-09-9 -8.88 311.87
168 MeLA E2 98665-12-4 -8.4 692.6
169 MeLA F 98665-10-2 -8.92 291.39
170 MeLA L 110267-46-4 -8.34 767.46
171 MeLA N 1276655-49-2 -7.62 2,620
172 MeLA P 647856-35-7 -7.11 6,120
173 MeLA Q 648430-32-4 -8.03 1,310
174 MeGlA A 98665-13-5 -9.48 111.8
175 MeGlA B 98683-74-0 -9.32 146.31
176 MeGlA D 102607-26-1 -9.04 234.95
177 Me20deHLA A 852936-70-0 -7.19 5,340
178 BuLA A 1207106-22-6 -8.36 740.68
179 BuLA B 1314143-37-7 -8.23 928.49
180 BuLA N 1207106-21-5 -7.35 4,090
181 Ganoderal A 106518-61-0 -7.74 2,130
182 Ganoderal B 106518-62-1 -9.56 97.8
183 Ganoderal F 114567-47-4 -9.17 190.81
184 Ganodermadiol 104700-96-1 -7.77 2,000
185 Ganodermatriol 105300-28-5 -8.06 1,230
186 Ganodermanonol 104700-97-2 -8.6 494.44
187 GAdiol 2006 107900-76-5 -8.66 452.08
188 GAtriol 106518-63-2 -8.47 622.13
189 89epoxyGA C - -9.08 221.51
190 89GA C - -8.73 401.72
191 89GA J 400604-10-6 -8.89 303.47
192 Ganolactone A 173268-82-1 -7.86 1,740
193 Ganolactone B 1028449-53-7 -7.72 2,210
194 Gsl A 138008-04-5 -8.44 650.14
195 Gsl B 138008-05-6 -7.37 3,960
196 Furano GA 120481-74-5 -7.12 6,060
197 EpGOH A 114020-56-3 -8.04 1,280
198 EpGOH B 114020-57-4 -8.36 739.99
199 EpGOH C 114020-58-5 -8.25 896.93
200 GaldTR 1225286-06-5 -8.75 385.99
201 GamdT 1341220-87-8 -7.25 4,860
202 Ganoderal A 104700-98-3 -8.4 694.04
203 Ganoderal B 114020-55-2 -7.76 2,070
204 Ganoderon B 252351-95-4 -7.42 3,620
205 Ganoderone A 873061-79-1 -8.26 882.3
206 Ganoderone C 873061-80-4 -8.47 615.75
207 Lucidumol A 217476-73-8 -9.08 222.02
208 Lucidumol B 107900-79-8 -8.8 356.42
Abbreviations: rG, free binding energy; Ki, inhibition constant; GA, ganoderic acid; pG4DNA, parallel G-quadruplex DNA; GLTs, triterpenoids isolated from Ganoderma lucidum.