Table 1.
Strains used in this study.
| Isolates | Race | Biovar | Phylotype | GenBank accession no. |
|---|---|---|---|---|
| RS345 | 1 | 3 | I/17 | KY594789 |
| RS346 | 1 | 3 | I/17 | KY594790 |
| RS347 | 1 | 3 | I/17 | KY594791 |
| RS348 | 1 | 3 | I/17 | KY594792 |
| RS353 | 1 | 4 | I/56 | KY594793 |
| RS355 | 1 | 4 | I/45 | KY594794 |
| RS356 | 1 | 4 | I/45 | KY594795 |
| RS357 | 1 | 4 | I/45 | KY594796 |
| RS362 | 1 | 3 | I/56 | KY594797 |
| RS364 | 1 | 3 | I/45 | KY594798 |
| RS365 | 1 | 3 | I/45 | KY594799 |
| RS366 | 1 | 3 | I/45 | KY594800 |
| RS371 | 1 | 4 | I/56 | KY594801 |
| RS372 | 1 | 4 | I/45 | KY594802 |
| RS373 | 1 | 4 | I/45 | KY594803 |
| RS374 | 1 | 4 | I/45 | KY594804 |
| RS375 | 1 | 4 | I/45 | KY594805 |
| RS376 | 1 | 4 | I/45 | KY594806 |
| RS377 | 1 | 4 | I/45 | KY594807 |
| RS378 | 1 | 4 | I/45 | KY594808 |
| RS379 | 1 | 4 | I/45 | KY594809 |
| RS380 | 1 | 4 | I/45 | KY594810 |
| RS381 | 1 | 4 | I/45 | KY594811 |
| RS382 | 1 | 4 | I/45 | KY594812 |
| Reference strains for egl | ||||
| Strains | host | Phylotype | GenBank accession no. | References |
| CFBP3059 | Eggplant | III/23 | AF295270 | Castillo and Greenberg, 2007 |
| MAFF301552 | Tomato | IV/8 | GU295042 | |
| DGBBC1125 | Potato | III/43 | GU295008 | |
| CMR33 | Tomato | III/20 | GU295007 | |
| CFBP1184 | Musa sp | II/4 | GU294935 | |
| UW28 | Potato | II/3 | GU295054 | |
| CFBP4787 | Potato | II/1 | GU294986 | |
| CFBP1410 | Bnana plantain | II/2 | GU294936 | |
| R288 | Morus alba | I/12 | GQ907153 | Fegan and Prior, 2005 |
| R28 | Syzygium aromaticum | IV/9 | DQ011552 | Fegan and Prior, 2006 |
| Pss4 | Tomato | I/15 | EU407264 | Lin et al., 2014 |
| CMR134 | Hucklererry | I/13 | EF439740 | Gabriel et al., 2009 |
| CIP365 | Potato | I/45 | GQ907151 | Prior and Fegan, 2005 |
| Psi7 | Tomato | IV/10 | EF371804 | |
| ACH732 | Tomato | IV/11 | GQ907150 | |
| CFBP6941 | Tomato | III/29 | EF439743 | Wicker et al., 2012 |
| Pe3 | Pepper | I/44 | FJ561155 | Xu et al., 2009 |
| O3 | Olive tree | I/44 | FJ561069 | |
| Tm1301 | Tomato | I/44 | FJ561087 | |
| Tm2 | Tomato | I/14 | FJ561134 | |
| M4 | Mulberry | I/12 | FJ561107 | |
| Pe11 | Pepper | I/17 | FJ561084 | |
| PSS219 | Tomato | I/34 | FJ561091 | |
| Reference strains for hrpB | ||||
| Strain | Host | GenBank accession no. | References | |
| Aoyu | / | FJ561168 | Xu et al., Unpublished | |
| CFBP734 | Potato | AF295627 | Poussier et al., 2000a | |
| CFBP2047 | Tomato | AF295615 | ||
| CFBP2958 | Tomato | AF295619 | ||
| CFBP2972 | Potato | AF295617 | ||
| GMI1000 | Tomato | AF295604 | ||
| JT516 | Potato | AF295611 | ||
| NCPPB3987 | Potato | AF295614 | ||
| R292 | Morus alba | AF295608 | ||
| CFBP3059 | Eggplant | DQ657471 | Castillo and Greenberg, 2007, | |
| MAFF301558 | Potato | AB508398 | ||
| NCPPB332 | Potato | DQ657473 | ||
| M4 | Mulberry | FJ561181 | Xu et al., 2009 | |
| Pe11 | Pepper | FJ561191 | ||
| Po2 | Potato | FJ561199 | ||
| Po10 | Potato | FJ561195 | ||
| Tb9 | Tobacco | FJ561223 | ||
| Tm1 | Tomato | FJ561224 | ||
| Tm10 | Tomato | FJ561225 | ||
| Tm11 | Tomato | FJ561226 | ||
| Tm82 | Tomato | FJ561234 | ||