Table 3.

The top KEGG orthology pathways predicted to be enriched in taxa that are differentially abundant in cohoused microbiomes

KEGG orthology pathway	χ2 statistic	Adjusted P value
Vibrio cholerae pathogenic cycle	263	1.29 × 10−56
Bacterial chemotaxis	131	7.27 × 10−28
Quorum sensing	130	1.06 × 10−27
Two-component system	130	1.14 × 10−27
Phosphotransferase system (PTS)	100	4.93 × 10−21
Flagellar assembly	79	2.14 × 10−16
Vibrio cholerae infection	70	1.92 × 10−14
Aminobenzoate degradation	70	2.42 × 10−14
Phenylalanine metabolism	49	9.19 × 10−10
Benzoate degradation	47	2.32 × 10−9